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Detailed information on CNT30185187


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 6e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Secale cerealeOryza sativa13.610098.54481forward
CNT30670969Secale cerealeSetaria viridis28.7289.0499.71016reverse complement
CNT30524649Secale cerealeSetaria italica48.451.9498.771712forward
CNT30641383Secale cerealeNymphaea colorata40.0145.2994.281415forward
CNT30550219Secale cerealeIpomoea triloba39.8632.4797.81410forward
CNT30702366Secale cerealeQuercus lobata28.1610098.19996reverse complement
CNT30378673Secale cerealeArabidopsis thaliana20.3657.7496.39720reverse complement
CNT30619000Secale cerealeSesamum indicum27.9932.4194.24990forward
CNT30283003Secale cerealeChenopodium quinoa25.4294.1497.55899reverse complement
CNT30730481Secale cerealeCorchorus capsularis33.596.3493.331185reverse complement
CNT30632346Secale cerealeVigna unguiculata38.6248.8497.511366forward
CNT30505560Secale cerealeNicotiana attenuata39.3362.9197.121391reverse complement
CNT30157603Secale cerealePistacia vera21.0678.0990.47745forward
CNT30299053Secale cerealeTriticum aestivum89.288.0599.333155forward
CNT30223648Secale cerealeHordeum vulgare61.8692.1395.982188forward
CNT30394721Secale cerealeTriticum turgidum10096.5699.633537forward
CNT30569655Secale cerealeActinidia chinensis39.7539.4896.941406forward
CNT30543268Secale cerealeBrassica napus33.5951.7695.21188forward
CNT30555751Secale cerealeOryza glaberrima12.0459.7598.12426reverse complement
CNT30147396Secale cerealeMedicago truncatula39.0446.4297.391381forward
CNT30439575Secale cerealeAegilops tauschii39.8610099.721410reverse complement
CNT30242786Secale cerealeAvena sativa24.6100.4698.51870forward
CNT30670388Secale cerealeTriticum dicoccoides79.2810099.292804forward
CNT30140120Secale cerealeLolium perenne82.9588.3598.742934forward
CNT3017956Secale cerealeZea mays53.2453.3997.241883forward
CNT30605068Secale cerealeGossypium raimondii32.7475.7996.81158reverse complement
CNT30216563Secale cerealeKalanchoe fedtschenkoi38.7635.2597.811371forward
CNT30655407Secale cerealeRosa chinensis39.5541.8597.211399forward
CNT30207637Secale cerealeHelianthus annuus30.1754.5594.191067forward
CNT30628241Secale cerealeDaucus carota36.9848.4498.621308reverse complement
CNT30688989Secale cerealeTriticum urartu55.0598.9899.851947forward
CNT30721631Secale cerealeTriticum spelta98.22100.0399.573474forward
CNT30346087Secale cerealeEragrostis tef23.9882.0199.76848forward
CNT30360996Secale cerealeLactuca sativa30.1473.0694.931066forward
CNT30429739Secale cerealePapaver somniferum36.8440.593.861303forward
CNT30571858Secale cerealeVitis vinifera40.6841.5297.711439reverse complement
CNT3056076Secale cerealeAmborella trichopoda33.195192.671174forward
CNT30108930Secale cerealeOryza longistaminata46.6870.5698.551651forward
CNT3038324Secale cerealeCucumis melo37.1869.7297.341315reverse complement
CNT30499372Secale cerealeDigitaria exilis52.5654.6998.551859forward
CNT30603680Secale cerealeOryza punctata55.0749.3598.561948forward
CNT30557400Secale cerealePanicum hallii18.5247.7498.02655forward

Expression of CNT30185187

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCH*

>peptide 2 (48 aa)
ESVAVSNRDCVGVRSCSTLSKIMHWMDARALRRKDAFRGERPWGEIFL*

>peptide 3 (84 aa)
MSAKAVALPYTRIRFLAGADTDFSLKAKKKKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCRTPSFLISVLAFFIFRRGL*

>peptide 4 (76 aa)
GKCCCVKSRLCGCPLMFDAIENHALDGCPGIEKEGRFQRRKAMGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAN*

>peptide 5 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQP*

>peptide 6 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 7 (35 aa)
MAYLSHDGSARKWEQRLKPLGVGAFQRWKIYVLPI*

>peptide 8 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 9 (31 aa)
WKVLLCQIEIVWVSAHVRRYRKSCIGWMPGH*

Sequence

>CNT30185187
TGGAAAGTGTTGCTGTGTCAAATCGAGATTGTGTGGGTGTCCGCTCATGTTCGACGCTATCGAAAATCATGCATTGGATGGATGCCCGGGCATTGAGAAG
GAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGC
GCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAA
CAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTT
GCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAACACAGGACTGATGACGGGGGGGGGCGCGCAGTGAAC
TGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCG
AATGATGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAA
GAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCGCGGGCGCACTCACTCTAATGGCGTACCTTT
CGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGA
AACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTA
GGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGG
GCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAA
GTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGG
AAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACCGAAGCGACGAGACC
TTGAAAGCAGCTTTTTCAAGTGTCACTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGAC
ATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACC
CCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATGCCTGGATCGTCGGAGCGAATTGGATGATCGGGCCG
AGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGTCAACTAATTCAGAGGGGCTCGGCTGGCCCGGTCGC
CCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCTAAAACCTGTAGTTTTGAAGCAAGGGATGAGCGCGAAA
GCCGTTGCGCTTCCTTACACGCGCATACGTTTTCTTGCTGGGGCGGACACGGATTTCTCTCTAAAGGCGAAGAAAAAGAAGTGGGCGAACACTCGGCCCA
GCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGCCGAACTCCTTCCTTTCT
CATTTCAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGTCTTTTGATTAGAGTGGAGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCG
CGAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAAC
TGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTC
GGGAGAAGGGGTGTTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACA
CGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTA
ACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTG
AATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGAT
AGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGGCGGGACAC
TGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAATGGT
ATAAGCCTGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATC
AAAGGTACGCCGGGGATAATAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAG
AAGGTCCCAAGGGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAA
GGGAGAACTGCGAGGAGCCAGCCCTAGTACGAGAGGACTGGGCTGGGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGT
TGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTCTATACAAGTTCTCGTACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTAAGCACC
GCGAGGTGTGAAGCGATCTCGTACTAAACGAATGGAA