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Detailed information on CNT30184264


BLAST search results

BLAST vs Swiss-Prot:
sp|P58420|NU4C_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONTPRT004570, E-value = 5e-40

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617438Secale cerealeSesamum indicum9.6526.3689.09165forward
CNT30196709Secale cerealePisum sativum39.1237.982.81669forward
CNT30221821Secale cerealeHordeum vulgare54.6274.9696.68934forward
CNT30394664Secale cerealeTriticum turgidum50.4789.0698.73863forward
CNT3017910Secale cerealeZea mays54.7438.8193.27936forward
CNT30610707Secale cerealeGossypium raimondii14.9767.5587.5256forward
CNT30231113Secale cerealeAnanas comosus34.3977.8888.61588forward
CNT3055427Secale cerealeAmborella trichopoda23.9214.8283.62409forward

Expression of CNT30184264

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MIKKIKGLAKKIILFDHYTLRASGNRIIANSV*

>peptide 2 (31 aa)
MLPSLIIFPLKAYMYYNVLPHGYLVTTYVGV*

>peptide 3 (42 aa)
MEPPAVYKINFVAEYRRXXXXTHVRYRGISYSFFEISLTKRS*

>peptide 4 (31 aa)
MLPSLIIFPLKAYMYYNVLPHGYLVTTYVGV*

Sequence

>CNT30184264
AAAAAGATACAGATTAAAATAAAGAGTTCTCGTGGTCCAGAATCCACAAAATTTGCATTTGGAACATTAAATAGCTTGTATCCATAGAACATCTGGCGTA
ACATAGATAATAAATAAATAGGAGTTAATATCATTCCAATTGCCATTACAAAAGTAATTAGTGTTTTTGGCATTAACAGAAATTTTGGACTAGTAATTAG
TCCAAAAAATACTACTAATTCTGCGACAAAACCACTCATTCCTGGTAAGGCAAGAGAAGCCATTGAAAAGCTACTAAACATGGTAAAAAATTTAGGCATT
GGGATAGATATCCCCCCTAGTTCTTCGAGATAAACAAGACGCATTCTATCAGAAGCGGTTCCTGCCAAGAAAAAAAGTGTAGCACCAATAAATCCATGGG
ATAATATTTGTAAAATAGCTCCATTGAGTCCAATGTTGGTTATGGAACCAATTCCTACAATTATGAAACCCATGTGAGATACAGAGGAATAAGCTATTCT
TTTTTTGAAATTTCGTTGACCAAGAGAAGTTGAAGCTGCATAGATTATTTGGATCGCTGCTATTATTACTAACCAGGGCGAAAATAGATAATGAGCATGA
GGTAACAATTCCATGTTGATCCGAATCAATCCATATGCTCCCATCTTTAATAATATTCCCGCTAAAAGCATACATGTACTATAATGTGCTTCCCCATGGG
TATCTGGTAACCACGTATGTCGGGGTATAATCGGCAATTTGACAGCATAAGCAATAAGGAAGCCAAAATATAAAAGTATTTCCAAGGTTGCAGGGTATGA
TTGATTAATTAATCTTTCCAAATCTAATCCTGGTTCGTTGGAACCATATAAGCCCATACCCAGAACTCCGATTAAGAAAAAAAATGGAACCGCCTGCAGT
ATACAAAATAAACTTTGTAGCTGAATATAGACGCNNNNNNNNNNAAACCCATGTGAGATACAGAGGAATAAGCTATTCTTTTTTTGAAATTTCGTTGACC
AAGAGAAGTTGAAGCTGCATAGATTATTTGGATCGCTCCTATTATTACTAACCAGGGCGAAAATAGATAATGAGCATGAGGTAACAATTCCATGTTGATC
CGAATCAATCCATATGCTCCCATCTTTAATAATATTCCCGCTAAAAGCATACATGTACTATAATGTGCTTCCCCATGGGTATCTGGTAACCACGTATGTA
GGGGTATAATCGGCAATTTGACAGCATAAGCAATAAGGAAGCCAAAATATAAAAGTATTTCCAAGGTTGCAGGGTATGATTGATTAATTAATCTTTCCAA
ATCTAATCCTGGTTCGTTGGAACCATATAAGCCCATACCCAGAACTCCGATTAAGAAAAAAAATGGAACCGCCTGCAGTATACAAAATAAACTTTGTAGC
TGAATATAGACGCCTCTTTCCCCCCCACATGGATAAAAGTAAGTAAACAGGAATTAATTCTAACTCCCACATGATAAAAAAAATAAAAGGTCTCGCGAAG
AAAATAATCCTATTTGACCACTATACATTGCGAGCATCAGGAAATAGAATAATCGCGAATTCCGTGTAATTGGCCAAGCTGCTAAAGTAGCTAAAGTAGT
GATAAATCCTGTCAATAAAATAGATCCTAATGAAAGTCCATCGTTTCCCAATCTCCAGTGGAAATCGAATACATCTATCCATTTATAATCCTCCTTTAAT
TGGATTAAGG