Detailed information on CNT30184167


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30301196Secale cerealeTriticum aestivum59.2826.4186.64262forward

Expression of CNT30184167

Peptides detected in this lncRNA

>peptide 1 (47 aa)
SISVLFYGVGASKNRSTAIEAVVMRLFAAARNGNNRSPSCWLAMLAN*

>peptide 2 (29 aa)
HLCSLLWRRRQQKSKHGYRGGGDETICSS*

>peptide 3 (63 aa)
MEITEVHLVGWQCWPTDLPTHFQRRHLRVQQTTTPGILNPSFSLSLSTDTYRQAGATAELAAR*

Sequence

>CNT30184167
TCCATCTCTGTTCTCTTCTATGGCGTCGGCGCCAGCAAAAATCGAAGCACGGCTATAGAGGCGGTGGTGATGAGACTATTTGCAGCAGCTAGAAATGGAA
ATAACAGAAGTCCATCTTGTTGGTTGGCAATGCTGGCCAACTGATCTCCCAACGCATTTCCAAAGAAGACACCTCCGTGTGCAGCAAACGACAACGCCCG
GGATTCTGAATCCCTCGTTTTCATTGAGCCTCAGCACCGACACCTACAGGCAGGCTGGTGCCACCGCAGAATTGGCAGCACGATGAAGCTACTTGTTCGC
GCAAGCCTTGAGATGACACTGAGCAAAACAAAGTCTGGCCTGTAGCATCCTCTGTGTTGTGCTTGTTTTTGTAAATTTGCAAGTGTCTCAATCTGATTTG
AGTTTGCATGAGTATCAAATGGACTAACAAGGCAAGTAACTG