Detailed information on CNT30183688


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30487788Secale cerealeOlea europaea42.316.4189.7788forward

Expression of CNT30183688

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSVD

>peptide 2 (68 aa)
WPTLTPVIFGSYLVFRVCLDLVPLAQPAPKQCFTPRCPVNCCASTHFGENQLALGSSGISPLTTTHPLI

>peptide 3 (35 aa)
LADLDPCYFWVLSSIQSLPRFGTARAARTETVLYP*

Sequence

>CNT30183688
CTGGCCGACCTTGACCCCTGTTATTTTTGGGTCCTATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCGCGCAGCCCGCACCGAAACAGTGCTTT
ACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATC
CGTTGATT