Detailed information on CNT30183531


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287494Secale cerealeTriticum aestivum89.9340.8992375forward
CNT30385899Secale cerealeTriticum turgidum89.9340.3792375forward
CNT30435746Secale cerealeAegilops tauschii96.8877.3993.56404forward
CNT30657929Secale cerealeTriticum dicoccoides86.5740.1191.97361forward

Expression of CNT30183531

Peptides detected in this lncRNA

>peptide 1 (37 aa)
YKMVFERHQALLQLLISIFRNIFLRVVMVCSLMGTNK*

Sequence

>CNT30183531
TACAAGATGGTCTTTGAAAGACATCAGGCTCTGCTCCAGCTATTGATATCCATTTTCAGGAACATATTCTTACGGGTGGTCATGGTCTGCTCGTTGATGG
GCACAAACAAGTAATTGAGGCTCTCGCTCAAGGTCTTAATCAGAGTTGTAGATACTGTAGATACTTGGCCTGACCAACTCAAGGTCTTGACACCCCTCTC
AATCAGAGGTGTAAATACTTAGCCTTACTAGAATAGCAGATAATTATCCTGACCAACAACTTAGGTGTTCTGCTAGCTGTACGAAACATTAGCTATGTTT
ACTTCTTTAATTCTGGCTTGAAATTGACCATGAGTCTGTAATTGAACAAGAATCTGATGTGTACATTGAATTTTGGCAGCAATTTATAATTTTTAATTAT
GGCCCAGAATTTAATTA