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Detailed information on CNT30183427


BLAST search results

BLAST vs Swiss-Prot:
sp|P05698|RBL_HORVU, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30323704Secale cerealeAsparagus officinalis10.8498.9992.18294forward

Expression of CNT30183427

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

>peptide 2 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

>peptide 3 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

Sequence

>CNT30183427
AAAAAAGATTGAGCCGAGTTTAATTGCAATCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTGATTTTTTTCTCTTTTTATTTCGTTTCTTT
TTTATTTATACCTTCTTTATCTTTAGTTTTATCTAGTTAATCGATAGTATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCG
GCTAGTTCAGGACTCCATTTGCAAGCTGCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAG
CCAATCGATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAAAGATTTCGGTCAG
AGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAGTCCTGAGTGAAAAAGATACCGCGAGCACGATCT
TTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTC
CCCCAGACATACGCAATGCTTTAGCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAG
TAGGCCATTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCCTAATTCTCTTGCA
AATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGCTTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTT
CGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATA
ACACGCTCTACCATAATTTTTTGCGGATAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACT
TGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGT
TACCCACAATGGAAGTAAAAATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAAC
AGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACT
GCAGCCCCTGCTTCTTCGGGCGGAACCCCAGGCTGAGGACTTACTCGGAATGCTGCCAAGATATCAGTATCCTTAGTTTCATACTCTGGGGTGTAGTAAG
TCAATTTATAATCTTTAACACCAGCTTGAAGTCCAACACCTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGATAATCCCAATTTTGGTTTAAT
AGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGA
ATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCCACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATA
GGTCTAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAG
TCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGTCGCATTCAAGTAATGCCCCTTGATTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCA
CAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACG
CTCTACCATAATTTTTTGCGGATAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGAT
ACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAATACGTTACCCA
CAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTC
GATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCC
CCTGCTTCTTCGGGCGGAACCCCAGGCTGAGGACTTACTCGGAATGCTGCCAAGATATCAGTATCCTTAGTTTCATACTCTGGGGTGTAGTAAGTCAATT
TATAATCTTTAACACCAGCTTGAACTCCAACACCTGCTTTAGTTTCTGTTTGTGGTGACATAAGTCCCTCCCTATAACTCTTGAATTAAGAATTCTCACA
ATAACAGGGTC