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Detailed information on CNT3018340

BLAST search results

BLAST vs Swiss-Prot:
sp|Q6L3F9|RK22_SACHY, E-value = 8e-66

BLAST vs NONCODE:
NONORUT000960, E-value = 1e-70

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30694723	Zea mays	Oryza sativa	37.46	11.01	92.79	499	forward
CNT30503443	Zea mays	Nicotiana attenuata	7.58	29.88	87.13	101	forward
CNT30185636	Zea mays	Secale cereale	23.72	20.39	92.41	316	forward
CNT30293259	Zea mays	Triticum aestivum	23.72	22.46	92.41	316	forward
CNT30224357	Zea mays	Hordeum vulgare	23.72	20.93	93.35	316	forward
CNT3086712	Zea mays	Vigna radiata	7.43	33.22	88.89	99	forward
CNT30257804	Zea mays	Avena sativa	22.22	44.92	91.55	296	forward
CNT30447572	Zea mays	Saccharum spontaneum	62.16	48.11	97.22	828	forward
CNT30684618	Zea mays	Triticum urartu	54.95	76.81	89.48	732	forward
CNT30349424	Zea mays	Eragrostis tef	9.83	29.98	97.71	131	forward
CNT30358685	Zea mays	Lactuca sativa	6.31	21.65	90.48	84	forward
CNT30415027	Zea mays	Papaver somniferum	6.46	22.05	90.7	86	forward
CNT30585636	Zea mays	Echinochloa crusgalli	59.31	13.76	94.94	790	forward
CNT30604560	Zea mays	Oryza punctata	23.72	31.38	94.3	316	forward
CNT30557814	Zea mays	Panicum hallii	34.83	44.87	96.77	464	forward

Expression of CNT3018340

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MRFCALKTRSNLSRRSVGTFLASFLSPFFFFILGVYFTNLKLVINKVITRLPLLYLII*

>peptide 2 (41 aa)
FLVNSIAFFIAFRNETLFFNWKSYIFRKNIRLSIRFFKPFR*

>peptide 3 (38 aa)
MPSRHEFPQFATYHRICYVNRYMFFSIMNRDCMANHCG*

>peptide 4 (33 aa)
MVILGCTKSETEWIYFLSIFFYYISFFYWESKS*

Sequence

>CNT3018340
TTTTTAGTTAATTCAATAGCTTTTTTCATTGCTTTTCGGAATGAAACTCTATTTTTTAATTGGAAAAGCTATATATTCCGCAAGAATATTAGGTTGTCTA
TAAGGTTCTTTAAACCTTTTCGATAGCAATATTAAGTCTCTGGTTTACAGAATTAACTTCCTTTTGGAGATCTTTCTCTAATTCTTCGATTGCTCCCTTT
TTCTTTAATAAGTTGGGGAATCCAATATGGATTATGACGTGGATTGTATCGATTTCTTTTTGAATTTCTATATGTGTAATTACTTCAGAACTTGAGTCTG
ATTCCATTTTTCTATTCGAGCCTTTTTTCCTATTCTTTTGTATATAGTTCTTGATACAATTCCGTATTTTTTTATCTTCCTGTAGACCTTCAGAATATTT
TTTGGTTGTGCGAACCAAAAGGAATGGTGATTTTGGGTTGTACCAAGTCTGAAACCGAGTGGATTTATTTTTTGTCCATATTTTTCTATTATATTTCTTT
TTTTTACTGGGAATCGAAATCTTAGATTGATCTAAAGATTATTTTGATTTCTTTACTATATTTAGTACAATTGTTATATTACACATCGTTTTTTTTATAG
AAATAACTACGTCCTCGAGCTCGAGGTCTGAATTTTTTTCATAATAGTACTCCTACTGACTTCGGCTTTAGTGATGAATAAATTCGTTTTGTCGAAATCC
CTATAATGAGTAGCATTTGCTGCTGCCGAATAAACCAACTTTAAGATGGGATACGATGCTCGATAAGGCATGAGATTCAGTATCATAACGGTTTCCTCGT
AGTAACGCCAGCGAATCTCATCTAGAACTCTTTGTGCTTTAAAAACAGACATATGTATGCGTTTTTGTGCTTTGAAAACCCGTTCGAATTTAAGTAGACG
ATCGGTTGGAACTTTTCTTGCGAGTTTTCTCAGCCCCTTCTTCTTCTTTATCCTAGGGGTATACTTTACCAATTTGAAACTTGTCATAAATAAGGTTATT
ACCCGCCTACCTTTACTTTATTTGATTATTTGAAGTCCTATAAATTTTGTTTATTCTGAATCTTCTATTCTGAAATTCAATTAACGACGAGATTTAGTAT
CCTTTCTTGTACTTTCATAACTCGTGAAATGCCGAGTAGGCATGAATTCCCCCAATTTGCGACCTACCATAGGATTTGTTATGTAAATAGGTATATGTTC
TTTTCCATTATGAATCGCGATTGTATGGCCAACCATTGCGGGTAGAATGCTAGATGCCCGGGACCACGTTACTATTATTTCTTTCTCCTCCTTCATATTG
ACCTTTTCGATTTTTGCCAATAAATGACGAGC