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Detailed information on CNT3018333


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 7e-57

BLAST vs NONCODE:
NONZMAT001339, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Zea maysOryza sativa70.0978.1699.552001forward
CNT30677010Zea maysSetaria viridis29.8191.5194.12851forward
CNT30524664Zea maysSetaria italica32.4767.7198.92927forward
CNT30500477Zea maysCoffea canephora50.3378.9194.571437forward
CNT30730500Zea maysCorchorus capsularis40.4297.2294.711154forward
CNT30503431Zea maysNicotiana attenuata35.6273.6495.671017reverse complement
CNT3044711Zea maysPrunus dulcis17.02101.8994.44486reverse complement
CNT30186247Zea maysSecale cereale49.1898.7399.431404forward
CNT30291213Zea maysTriticum aestivum76.3662.7599.272180forward
CNT30225309Zea maysHordeum vulgare37.0687.895.461058forward
CNT30400299Zea maysTriticum turgidum49.6766.4899.221418forward
CNT30588765Zea maysMusa acuminata21.2686.9695.72607reverse complement
CNT30444225Zea maysAegilops tauschii38.6710099.091104forward
CNT30248027Zea maysAvena sativa34.0599.7997.43972reverse complement
CNT30668159Zea maysTriticum dicoccoides25.0110095.8714forward
CNT30310298Zea maysCamelina sativa35.867.0295.41022reverse complement
CNT3062651Zea maysArabidopsis lyrata24.1382.8195.94689reverse complement
CNT30460950Zea maysSaccharum spontaneum97.5893.9399.642786forward
CNT30136065Zea maysLolium perenne22.59100.4797.98645forward
CNT30713553Zea maysMalus domestica golden18.2177.1593.65520forward
CNT30689042Zea maysTriticum urartu72.4771.7998.72069forward
CNT30720907Zea maysTriticum spelta35.7610099.411021reverse complement
CNT30364730Zea maysSorghum bicolor13.9870.3799.25399reverse complement
CNT30410430Zea maysPapaver somniferum50.449.7494.231439reverse complement
CNT30646402Zea maysCannabis sativa38.4286.7289.71097reverse complement
CNT30332807Zea maysDioscorea rotundata49.4985.5396.041413reverse complement
CNT30148090Zea maysBrachypodium distachyon53.5252.699.541528reverse complement
CNT30576679Zea maysOryza barthii12.9270.2997.83369forward
CNT30585638Zea maysEchinochloa crusgalli27.5350.78100786reverse complement
CNT30604015Zea maysOryza punctata17.65104.3595.63504reverse complement

Expression of CNT3018333

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRR*

>peptide 2 (48 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA*

>peptide 3 (36 aa)
MSALSSDFPRASGSTAETATGSPPIRGWSDRSMEIG*

>peptide 4 (32 aa)
MSKCIGRGAFRLRGKQTRKRGSTKRKRECRLE*

>peptide 5 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 6 (38 aa)
MSRRLIGSGLVKGMEPTGAVAKASLHRAIVTAYGPEPG*

>peptide 7 (59 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRYDPKITGVKVGQ*

>peptide 8 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSKRESGGRRSGSENVGLSNENIGENPMPRKPKVSSARFVHGG*

>peptide 9 (79 aa)
MSVKMRTTCTWTERPYEALLFPGIGFGLFLRSLGGRRRRPPSGGARAISEIPLWKSSDSNLVSDPRAKGQSQVDSFYGA*

Sequence

>CNT3018333
CAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCC
TAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTTGTGCTGCTAGGCGAAGCGGTTGAGTGCCGCACCCTAGATGGCTAAAGTCCAGTAGCCG
AAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGT
GACCGATAGCGAAGTAGTACCGTGAGGGAAAGGTGAAAAGAACCCCCAGTGGGTAGTGAAATAGAACGTGAAACCGTGCTGAGCTCCCAAGCAGTGGGAG
GGGAAAGTGATCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAATGGAACCCACCGGAGCCGTAGCGAA
AGCGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCG
AACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCG
CAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCTGCGCGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCAA
AAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACC
GCTCAGTGATAAAGGAGGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCC
CTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTCAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCAAACGCG
AAAGCGGGGGTCGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGTTTCCTCCGCAAG
GTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTCAATATTCCTGTACTACCCCTTGTTGGTACGGA
GGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATAGGTTTAAGGACACAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAATGCCTCG
AGCCGAGGTCCGAGTACCAAGCGCTGCAGCGCTGAAGTATGAGCCCCGTGGACTAGCCATTGCTTCTCCACGAGGCTCATACCAGGCGCTACGGCGCTGA
AGTATGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATAC
CTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCGCAAAAGGGGGTCGCAGTGACCAG
GCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGG
TGAACTGATGACAGGGAAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCG
ACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAA
AGACCCTATGAAGCTTTACTGTTCCCTGGGATTGGCTTTGGGCTTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCCCCTTCCGGGGGGGCCCGAG
CCATCAGTGAGATACCACTCTGGAAGAGCTCGGATTCTAACCTTGTGTCAGACCCGCGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTA
GGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGACATTGGTCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACTC
ACCCGTCGAGCAGAGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCT
GATCTTCCCCAAGAGTCCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGAGCTGTAGGTGGTTCCAAGGGTTGGGCTGTTCG
CCCATTAATGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTA
CGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCTACGGTAAACGCTGGGTAGCCAAGTGTGGAGAGGATAACTGCTGAAAGCATAT
AAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCTCCTCCGACTTCCCTAGAGCCTCCGGTAGCACAGCCGAGACAGCGACGGGTTCTCCACCCATACGGG
GATGGAGCGACAGAAGTATGGAAATAGGATAAGGTAGCGGCGAGACGAGCCGTTT