Detailed information on CNT30182409


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390769Secale cerealeTriticum turgidum48.5520.3284.11151forward
CNT30555885Secale cerealeOryza glaberrima28.948.2784.4490forward
CNT30444121Secale cerealeAegilops tauschii48.8744.0684.87152forward
CNT30117815Secale cerealeOryza nivara31.5128.4183.6798forward

Expression of CNT30182409

Peptides detected in this lncRNA

>peptide 1 (41 aa)
ADAAAAGRRRAGAAAPCIGDAGAQGGVHLAAGDGCVGGHEE*

>peptide 2 (69 aa)
MQGPKAEFTWPQEMAASEAMRSSAASRVTSTSLIAAVRAISAELAVLVVEGSRGVGGIARFATGIGEDL*

Sequence

>CNT30182409
GCTGACGCCGCTGCAGCAGGCCGCAGACGGGCTGGCGCCGCTGCCCCGTGCATAGGAGATGCAGGGGCCCAAGGCGGAGTTCACCTGGCCGCAGGAGATG
GCTGCGTCGGAGGCCATGAGGAGTAGTGCTGCCAGCAGGGTGACCAGCACGAGCTTAATAGCTGCAGTGCGAGCCATCTCGGCCGAGTTAGCTGTACTTG
TGGTGGAGGGCTCACGGGGAGTGGGTGGAATAGCTAGATTTGCTACTGGTATTGGTGAGGATCTATAGGGGGTGCATGTGCTTAAATAGGGCTTCTACGA
GTTCTCACCAA