Detailed information on CNT3018231


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003894, E-value = 1e-150

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3082954Zea maysBrassica juncea69.416.5390.77195reverse complement

Expression of CNT3018231

Peptides detected in this lncRNA

>peptide 1 (59 aa)
CPSTTPFGLILGPDSPSVDEPCGGNLGFSGHWILTNVFVTQADILASASSTPAFAFASL*

>peptide 2 (34 aa)
MFSLLKPTFSLPLRRPPLSRLLPSKAERSPTDAF*

Sequence

>CNT3018231
TGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGGAGGAAACCTTGGGTTTTCGGGGCATTGGATTC
TCACCAATGTTTTCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCGACCCCCGCTTTCGCGTTTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCG
ATGCATTTTGACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCAGCGCAAGGGCGCTCGATCAGTGAGCTA