Detailed information on CNT3018219


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6L3B6|RR19_SACHY, E-value = 4e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30198198Zea maysPisum sativum20.424.7685.2968forward
CNT30336888Zea maysCynara cardunculus29.133.0484.5497forward

Expression of CNT3018219

Peptides detected in this lncRNA

>peptide 1 (37 aa)
ASFLSPFFFFILGVYFTNLKLVINKVITRLPLLYLII*

>peptide 2 (38 aa)
MPSRHEFPQFATYHRICYVNRYMFFSIMNRDCMANHCG*

Sequence

>CNT3018219
GCGAGTTTTCTCAGCCCCTTCTTCTTCTTTATCCTAGGGGTATACTTTACCAATTTGAAACTTGTCATAAATAAGGTTATTACCCGCCTACCTTTACTTT
ATTTGATTATTTGAATCCTATAAATTTTGTTTATTCTGAATCTTTCTATTCTGAATTCAATTAACGACGAGATTTAGTATCCTTTCTTGTACTTTCATAA
CTCGTGAAATGCCGAGTAGGCACGAATTCCCCCAATTTGCGACCTACCATAGGATTTGTTATGTAAATAGGTATATGTTCTTTTCCATTATGAATCGCGA
TTGTATGGCCAACCATTGCGGGTAGAATGCTAG