Detailed information on CNT3018193


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617621Zea maysSesamum indicum74.3778.0391.26206forward
CNT30198622Zea maysPisum sativum54.1518.4588.67150forward
CNT30502639Zea maysNicotiana attenuata32.138.8187.6489reverse complement
CNT3093954Zea maysSolanum tuberosum59.2110.0291.46164forward
CNT30396203Zea maysTriticum turgidum92.7888.0197.28257forward
CNT30509771Zea maysSolanum lycopersicum58.4815.4688.89162reverse complement
CNT30555485Zea maysOryza glaberrima71.1215.7798.48197forward
CNT30441793Zea maysAegilops tauschii91.755.5896.46254reverse complement
CNT30314546Zea maysCamelina sativa86.2826.6490.38239forward
CNT3077259Zea maysBrassica juncea33.9410.5590.4394forward
CNT30339731Zea maysEragrostis tef36.129.8598100reverse complement
CNT30360899Zea maysLactuca sativa88.4543.4489.39245reverse complement

Expression of CNT3018193

Peptides detected in this lncRNA

>peptide 1 (57 aa)
RSLDRWILYESYDEVPHEWIYRKGIQIRRIAHVMIFYILGLRVPSSGLCSSCSIQIE*

Sequence

>CNT3018193
CGATCTCTAGACAGATGGATCTTATATGAATCGTATGATGAAGTACCACATGAGTGGATATATAGAAAAGGAATCCAAATCCGCCGAATCGCTCATGTTA
TGATCTTCTACATCCTAGGTCTCCGCGTTCCGTCATCTGGCTTATGTTCTTCATGTAGCATTCAGATCGAATGACTCTATGAAATTACGTCGATACTTCC
ACATATTATGGGTAACGTAGGAGACATCCCTATTTTCACCCGGGGGTCTTAATTACCACTGCTTAACTTTCAATTCG