Detailed information on CNT30181606


BLAST search results

BLAST vs Swiss-Prot:
sp|P80264|NDUS2_SOLTU, E-value = 7e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548493Secale cerealeIpomoea triloba27.6158.2493.4470reverse complement
CNT30619472Secale cerealeSesamum indicum15.9842.592.28272reverse complement
CNT30405732Secale cerealeBeta vulgaris47.5965.4389.38810forward
CNT30201968Secale cerealePisum sativum35.1974.9793.49599forward
CNT30164425Secale cerealePistacia vera40.0136.6991.78681reverse complement
CNT30592657Secale cerealeMusa acuminata39.8419.2587.46678forward
CNT30544645Secale cerealeBrassica napus28.0842.7590.79478forward
CNT30239187Secale cerealeBrassica oleracea32.0244.8290.64545forward
CNT30510913Secale cerealeSolanum lycopersicum15.9236.4291.51271reverse complement
CNT3079706Secale cerealeBrassica juncea31.6147.6191.64538forward
CNT30726873Secale cerealeLupinus angustifolius13.473.0891.23228forward

Expression of CNT30181606

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MLRMLRHGIDRFSSPSFPVHSLCISDTQGRTRWEESCPSLCPVDHSAGILHSRLRLTAARECSCRYVSLSGSLAPPLISFYDML*

>peptide 2 (73 aa)
NKEVILDLTIDHSIPTEPPLRSIYLCLSFLRTYPSNQKAKKKEKFLVCDLIGPKGVYSTHSPVSRTAQVCDSV*

>peptide 3 (69 aa)
MRTSFPFALPTLRSHGYQSGGRAGSRYHEPSVPHIYQEASVVHRFHRMLLSLGKDRVSVQLCFGCFAME*

>peptide 4 (66 aa)
MQSVSALDYSIPDRRIMAPQKHSIQQQHLLQPREDKTDVSYIRAFTAQRRSRTLPMIINPKERSTK*

>peptide 5 (30 aa)
MSSRMLRSGIRSEILDLPVPSRHGKEIRKK*

>peptide 6 (46 aa)
MALLCIGRTKPIANNKLFPAPSTLINSPILPSLSCQPIVSKHTAAN*

Sequence

>CNT30181606
AACAAAGAAGTCATCCTTGACTTGACTATTGACCATTCCATCCCTACCGAGCCGCCTCTTCGAAGTATTTACCTCTGCCTTTCTTTTTTGAGAACATACC
CTTCAAATCAAAAAGCAAAAAAGAAAGAAAAGTTCCTCGTCTGTGATTTAATCGGCCCTAAGGGAGTTTACTCGACCCATTCTCCAGTCTCCCGCACTGC
TCAAGTGTGCGACTCCGTATGAGGACCTCCTTCCCTTTTGCTCTGCCCACTCTCCGTTCACACGGTTATCAAAGCGGAGGAAGGGCGGGCAGCAGGTACC
ACGAGCCCTCTGTCCCACACATCTATCAAGAAGCAAGTGTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTCGGCAAAGATCGTGTGAGTGTGCAGTT
ATGCTTCGGATGCTTCGCCATGGAATAGATCGATTCAGTTCCCCTTCTTTTCCGGTGCACTCGCTTTGTATCTCCGACACACAAGGAAGGACGCGGTGGG
AAGAAAGCTGCCCTAGCCTCTGTCCGGTCGATCATTCCGCTGGCATCTTGCATTCACGCCTCCGTTTGACTGCCGCTCGGGAATGTAGTTGTAGATACGT
GAGTCTTAGTGGGTCGTTGGCTCCACCTCTTATCTCCTTCTACGACATGCTGTAGTCGTCGCCATATTCAATATGTCACTTAGTCATATCTGCCTCGCAG
CGGGTCAGCACCTCCGAAAGAAAGGGAGGGAGGACTTCATTCAGTGACTCCGCGATCGCCCTCTAAACGATCAAAATAAGGTAAAGCTTGAAGATAAGTT
TTGTACTCGATTAATTTCTCAGTCCCTCTAGTCGGTGATCCAATATGTGGTTCCGCACGTTCCACCACTTCTCCGTTCATTTCCAATACTGATCGTGAAA
CACCATGAGCAGCAGGATGTTGAGGTCCGGAATTCGAAGTGAAATTCTTGATTTGCCCGTTCCTAGTCGTCATGGGAAAGAAATAAGAAAGAAATAAGAA
AGAGATTATTCCCCTAGAGCTTGTCCAGTACCACCAGTACTCAAAATGCATCTCCGCGCGTCTACCTGGCGCTTTTATTAGCCGCCTTGCATGCAAGCGA
AGCGCTATTGGCGACAATTAATAGCTCACTGAGCGATGATTGATGCAGTCAGTCAGTGCCCTCGATTATTCTATTCCTGATAGAAGGATCATGGCGCCCC
AGAAGCATTCCATCCAGCAGCAGCATCTCCTTCAACCACGCGAGGACAAAACTGATGTTAGCTACATTCGAGCGTTCACCGCACAGAGGCGATCTCGAAC
ACTACCTATGATAATAAATCCAAAGGAAAGGTCGACAAAATGATTCAATCTGACTTTATCGGTATTCTGGATTGAGTAAAAAAGGGATATATGAAGTTCA
AGGCCTTGCCAAAACCGTCATGGCCCTATTATGTATAGGCCGTACTAAGCCAATAGCGAATAACAAACTCTTTCCTGCTCCCTCGACCTTAATTAACTCC
CCCATCCTGCCAAGCCTCAGCTGCCAGCCCATTGTATCTAAGCACACTGCGGCAAATTGATACAAGTAGCTAAAGATCTCGCATCCGACATCTCCGGCCG
AACGGTTAGGCAACACTAGGGCGCCTAGGTCAAAATTCCGCTTACCAAACAAGATGTCGAGAGGCGAACTCTGTAATTCCCCTCCTGCAAAAGTGATAGC
GG