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Detailed information on CNT30181361


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FU27|C3H2_ORYSJ, E-value = 3e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523217Secale cerealeSetaria italica49.0760.3486.79318forward
CNT30525311Secale cerealePhaseolus vulgaris12.522.8891.3681forward
CNT30291855Secale cerealeTriticum aestivum37.0438.197.08240forward
CNT30245719Secale cerealeAvena sativa61.7363.6993.75400forward
CNT30660728Secale cerealeTriticum dicoccoides37.1938.9397.1241forward

Expression of CNT30181361

Peptides detected in this lncRNA

>peptide 1 (95 aa)
DWLLVVQEAEVQWLQVGHEAGDAGLRAHGGGGEAVEAGGLGRAVGGRGGGVAGPATGRGRLRLGEAQLAERGEDVIDGRPDAGPVGRQWRRLGRW*

Sequence

>CNT30181361
TGGACTGGCTCCTCGTCGTCCAGGAAGCGGAGGTTCAGTGGCTCCAGGTTGGGCATGAAGCTGGAGACGCTGGTCTGAGGGCCCATGGGGGTGGTGGGGA
GGCTGTAGAGGCCGGCGGACTTGGGCGAGCCGTAGGCGGCAGGGGAGGTGGGGTAGCCGGACCAGCCACCGGACGGGGACGCCTGCGCCTTGGCGAGGCG
CAGCTGGCGGAGCGAGGCGAGGACGTCATTGACGGGCGACCCGACGCCGGGCCCGTCGGGAGACAATGGCGGCGACTCGGACGGTGGTGACTTGGGCGGC
GAGGAGAGCAGAGTGCTGGTGGGCGAGGAGGACATGATGCTCTTGCTGAGGTAGCTCTCGAAGGCCTGGCGGCGGAGCGGCGAGCCGTCGTAGGACTCGG
CGAGCGGCGACAGGGGCGTGCTCCTGGGGCTGGAGTGCTGGGACGGCATGGCGCGGAGCTGGTCCGGGGTGTGGGCGAAGAAGCAGACGCGGCGGCGGCA
GGCGGTGCCGGAGTAGTGGTACTTGCGCGGGTCGCGGCGGCGCGCCTTCTCCCCCGGGTGCGCGAAGGGGCACTCGGTCCAGTCGTGGCTGCGGCCGCGC
GCGCACCGGCGCACCTTGAAGTCGTACATGCGGAACTCGTCGCAGGCG