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Detailed information on CNT30181337


BLAST search results

BLAST vs Swiss-Prot:
sp|P11383|RBL_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3089355Secale cerealeVigna radiata23.0683.2283.87496forward
CNT30239038Secale cerealeBrassica oleracea29.9451.6486.96644forward
CNT30146680Secale cerealeMedicago truncatula24.0841.3486.68518forward
CNT30434683Secale cerealeAegilops tauschii20.9275.6399.33450forward
CNT30606537Secale cerealeGossypium raimondii33.0142.2481.83710forward
CNT30477828Secale cerealeArabidopsis halleri17.3973.4889.84374forward
CNT30622174Secale cerealeCajanus cajan17.9553.0287.05386forward
CNT30355674Secale cerealeLactuca sativa27.5780.3588.36593forward
CNT30100001Secale cerealeOryza rufipogon11.7698.0698.02253forward

Expression of CNT30181337

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

>peptide 2 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

Sequence

>CNT30181337
AAAAAAGATTGAGCCGAGTTTAATTGCAATCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTGATTTTTTTCTCTTTTTATTTCGTTTCTTT
TTTATTTATACCTTCTTTATCTTTAGTTTTATCTAGTTAATCGATAGTATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCG
GCTAGTTCAGGACTCCATTTGCAAGCTGCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAG
CCAATCGATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAAAGATTTCGGTCAG
AGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAGTCCTGAGTGAAAAAGATACCGCGAGCACGATCT
TTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTC
CCCCAGACATACGCAATGCTTTAGCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAG
TAGGCCATTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCCTAATTCTCTTGCA
AATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGCTTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTT
CGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATA
ACACGCTCTACCATAATTTTTTGCGGATAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACT
TGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACC
CACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGC
TCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGTCGCATTCAAGTAATGCCCCT
TGATTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAGTTTACGTTTTCATC
ATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGATAATCCCAATTTTGGTTTAATAGTACATCCCAAT
AAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGATCCT
CCAAACGTAGAGCACGTAGGGCTTTGAAACCAATACGTTACCCACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATGGATAA
GCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAA
CAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCGGAACCCCAGGCTGAGGACTTACTCGGAATGCTGCCAAGAT
ATCAGTATCCTTAGTTTCATACTCTGGGGTGTAGTAAGTCAATTTATAATCTTTAACACCAGCTTGAACTCCAACACCTGCTTTAGTTTCTGTTTGTGGT
GACATAAGTCCCTCCCTATAACTCTTGAATTAAGAATTCTCACAATAACAG