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Detailed information on CNT30181095


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 2e-90

BLAST vs NONCODE:
NONCQUT001608, E-value = 2e-11

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287280Secale cerealeTriticum aestivum46.1783.0893.4712forward
CNT30221752Secale cerealeHordeum vulgare36.8484.994.01568forward
CNT30386515Secale cerealeTriticum turgidum51.6257.5193.09796forward
CNT30436767Secale cerealeAegilops tauschii36.2574.9396.96559forward
CNT30252486Secale cerealeAvena sativa25.164.1891.21387forward
CNT30658347Secale cerealeTriticum dicoccoides34.6398.8996.44534forward
CNT30720492Secale cerealeTriticum spelta20.2362.0396.47312forward

Expression of CNT30181095

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGRSHMHCWVVHNEESLRVALKLMGTLEA*

>peptide 2 (49 aa)
MNRMRRCSTLGAKSINCINDARKICRQKKNCSLWAGLICIVGLSTMKKA*

>peptide 3 (57 aa)
MCMCVAGARIYICMLHNLCSYIHRTYRTKNMLWSESRVVHKSEVHKRPSYIGHCFNL*

>peptide 4 (30 aa)
MHAPQPMFVHTQNIQNEKYALVGKQSRAQK*

>peptide 5 (31 aa)
MHLILPPLLTLPRPALLERRLTGRPPVDLRP*

Sequence

>CNT30181095
GCTTTTCCTTCAATCAACAGCAAGACAATTGTCTGCTTATTGTATATAATAAATATGTATGTGTATGTGTGTAGCCGGTGCTAGAATTTACATATGCATG
CTCCACAACCTATGTTCGTACATACACAGAACATACAGAACGAAAAATATGCTCTGGTCGGAAAGCAGAGTCGTGCACAAAAGTGAAGTTCACAAAAGAC
CTTCATACATAGGCCATTGTTTCAACTTGTAGTTTAGGCCTTGCCCGACTCCTCGCAACCCGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGG
CGCATGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCGA
ACATAGGCAGCTTCCACATTGTCCAGTATCGACCGTCGTAGTACCCGGGGGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCTAGGCA
GGGCACCCACTTTGAGCGGATCAAGTAGTCGACCTGCTTCAGGAGGGCCTCTGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCAAACTTCTTGATGCCC
TCAATTGGCCACACCTGAATGAATAGAATGCGCAGATGCTCAACACTTGGTGCTAAGTCAATTAATTGTATCAATGATGCTAGAAAAATCTGTCGACAAA
AGAAAAATTGCTCCTTATGGGCAGGTCTCATATGCATTGTTGGGTTGTCCACAATGAAGAAAGCTTAAGGGTAGCCCTTAAACTGATGGGCACTCTGGAG
GCATGATGATAATACTTCCTCTGTTCACTATTATAAGATGTTTTGGATATTTCAATATAGACTAGATATAGACTGTAATGAGTAAACAAACACACTAAAA
CACGTTTATATACATCCGATTCAGAAAAATATTACAACATCTTATAATAGTGAACGGAGGGAGTATTATCTAGTCCACACTGCAACAAAAAGTAATTTCC
ATTCACTAAGTTATGAGTTGATTGCTTTTACTCACGGATCCCAGCTTATGGACAAGGCTAAATGAGCATCCAAAAACCAAATGGTTTCCATACGCAACCA
AACAAACAGATAATCTATTGACCACATTATGTTGTACTCCCTCCGTCCCAAAATAATTGAACTCTAGTACAATTTCGTACTATGTTACACTAAAATTGAG
ACACTTATTTTGGGACAGAGGGAGTACTTAATTCTAGTATATGGGTCCTATTTTAAGGATGGGTTTGGTTATATCTATTGGGGGTGTTCTGTAAGTGAAT
TACTTGTACTGAGTCACTGACGAAGAAACTCGTCAGTTTAATTAGTGCCTGACATACCTGCATGCACCTGATCCTTCCGCCGTTGCTGACGCTGCCGAGG
CCGGCGCTGCTGGAGCGGCGGCTGACGGGCAGGCCCCCGGTGGACTTGAGACCTTGAAAGGGTGCGACAGAGGTGGCCGAGGAAGCCATCACAGTGGGGG
CCATGGCGTTGGAGGAGAGAAGGTAGCAGGCTACGCTTGAGG