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Detailed information on CNT30180581


BLAST search results

BLAST vs Swiss-Prot:
sp|P04165|CYB_MAIZE, E-value = 5e-158

BLAST vs NONCODE:
NONVVIT000317, E-value = 3e-60

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548225Secale cerealeIpomoea triloba30.6855.3996.05683forward
CNT30378677Secale cerealeArabidopsis thaliana31.8125.8496.33708forward
CNT30619453Secale cerealeSesamum indicum10.7434.2496.65239forward
CNT30226609Secale cerealeHordeum vulgare53.2810099.491186reverse complement
CNT3088309Secale cerealeVigna radiata7.2320.0596.27161forward
CNT30443885Secale cerealeAegilops tauschii56.5160.111001258reverse complement
CNT30669339Secale cerealeTriticum dicoccoides10.7810099.58240forward
CNT30309525Secale cerealeCamelina sativa11.4161.597.64254forward
CNT3082246Secale cerealeBrassica juncea16.8945.2596.28376forward
CNT30627054Secale cerealeDaucus carota7.6447.0995.88170forward
CNT30688824Secale cerealeTriticum urartu51.6679.5898.611150forward
CNT30481172Secale cerealeChara braunii9.8866.0783.18220forward
CNT3038142Secale cerealeCucumis melo19.3662.5593.97431forward

Expression of CNT30180581

Peptides detected in this lncRNA

>peptide 1 (33 aa)
KKQFYPSQNVHPMDYLIHIDAMRPDEEDWRLLK*

>peptide 2 (46 aa)
MKAILLSYYSFFLVELWKGENLNKVTLGNSYWTRESQYDIGVGSTN*

>peptide 3 (44 aa)
MRWRSWLSSNHPPSAYLFPFYMISLLAPQGPVIYALHCMNSIPN*

>peptide 4 (43 aa)
MRRFIPFWREGGSESPGLRICRLVDSRNKVIRKKKLPLSLPVS*

>peptide 5 (36 aa)
MKVNHNEKHTCPISMHITEQPAPFNISHNVFYAVES*

>peptide 6 (66 aa)
MLKPINPLLNFFLFVVGQGAIHSALSDGDQKPLGYQEVGFSSVPFSRSGSVFGDGLVQAHIHSRWT*

>peptide 7 (57 aa)
MEILAIIKPSSLRLSLSFLYDKSTRASRAGHLRSPLHEQHSQLDLYGFRCLLFDSRL*

>peptide 8 (52 aa)
MKKFCLRANYLALFKRTSISISTKKELKINESNIVVLLLFFPCGALERREFE*

>peptide 9 (48 aa)
MLVKCGVYRLFKKRESLVPYSHFSFLSLQLLFPLIYPLALMEIGFAAP*

>peptide 10 (90 aa)
MGTKSHWATKKSDSVQSRFQDPVQCLGMAWSKPTSIVDGLEQASMPPTDMIDYDNYDMDWTVVQPIVLTRLPPRTPKTWGLFTRVSLARTK

Sequence

>CNT30180581
GTAAGAAGCAATTTTATCCATCTCAGAATGTACACCCAATGGATTATTTGATCCATATTGATGCAATGCGGCCAGATGAAGAAGACTGGCGCCTACTAAA
ATAAGGGGGAGTAAATGATGGAGACTAAAAAAACGATTTAAGGTGGCATTGTCCACGGAGAAACCACCCCAAAGCCAAGTCACTATGGTATCTCCTACTA
CTGGTATGGCGCTAGCTAAGCTTGTAATTACTGTTGCTCCCCAAAAGCTCATCTGACCCCAAGGTGGTACGTATCCTATAAAAGCTGTCACAATCATTAA
TAGGAATATGACAACTCCGAGACACCGAACAAATTCCCTAGGACTGCTATAACTCGCATGATATAGACCACGAAAAATATGAAGGTGAACCACAATGAGA
AACATACTTGCCCCATTAGCATGCATATAACGGAGCAACCAGCCCCCTTCAACATCTCTCATAATGTGTTCTACGCTGTTGAAAGCTAGATCCACATGAG
GTGTGTGATGCATAGCTAAAAAAATGCCAGTCACTATCTGAATGACTAAACAAATACCTGCTAACGAACCGAACCCCCACCAATAACTAAGATTGCTCGG
GGTTGGATAATCTATCAAATGTTGGTTAAGTGTGGAGTATATAGGTTGTTTAAGAAGAGAGAATCGTTGGTTCCTTATAGTCATTTCTCTTTTCTATCGT
TACAACTCCTCTTCCCCCTTATTTACCCCCTTGCCTTGATGGAAATTGGCTTCGCTGCGCCCTGAATAATCAAAAAGCTGCATGAGAAGATTCATCCCAT
TTTGGCGGGAGGGAGGCAGCGAATCACCTGGGCTACGGATTTGTCGGTTAGTTGATTCTCGAAATAAGGTCATTCGGAAAAAAAAACTGCCGCTTTCTCT
GCCGGTTTCTTAAGGCTTCAAACGAACGACTAGTCATTAAGAAACCCATGAAATCCAAGTCTATTTTGGACCTTTCATGAAGAAGTTTTGCCTGCGCGCA
AACTACCTAGCCCTTTTCAAAAGAACGTCGATTTCCATCTCAACAAAGAAAGAACTCAAAATAAATGAAAGCAATATTGTTGTCCTATTACTCTTTTTTC
CTTGTGGAGCTTTGGAAAGGAGAGAATTTGAATAAAGTAACTCTCGGAAACTCTTATTGGACGAGAGAGAGTCAATATGATATTGGCGTGGGTTCTACCA
ACTAAACGAAGAAGTTTTTGATTGGATAAACAGCGTATAATGATAGACGCTTCTTCGGCACACATGGAGACATACCTCCCGTAGCTGACCCCTGAATTCA
AGGATACTGCCGGCTTTGTTACTAACTGATAGAAACCCCTTAATACAACGTTCGTTTTTCATAAATGTCATAAGGTAGGTAGACCCGGTCTTGCGCTCGT
CCGGTTAAGTGGCACATTGTGCTAAGTGCTCGAACCGTTGGCTGATCTCAGCTGTATCGCCTCATACAAATTAGTTAAGCGAGAAAACAAACGGCTACAT
AGGAGCTCTATGGTGGACCACCAGCAGGAAGATCGAATGGCTTAGCGCATCCTGCGCCTACTGGACCTGACTTCGTAGGATACTCTGATAGACTAGTCGA
ATGGCAATGGCCTAGTGGTTGTATCTGCTTGCCGATTCCTATTAAGAATACGAGAGTGACAAATGAGATGGAGATCTTGGCTATCATCAAACCATCCTCC
CTCCGCTTATCTCTTTCCTTTCTATATGATAAGTCTACTCGCGCCTCAAGGGCCGGTCATTTACGCTCTCCACTGCATGAACAGCATTCCCAACTAGATC
TGTACGGCTTCCGTTGTCTCCTTTTCGATTCCCGACTCTAGCTCACAGGTATCCATAAGAGCGACCAGCCCTGAATGCTTAAACCTATCAATCCTCTCCT
AAATTTCTTTCTTTTTGTCGTTGGGCAAGGAGCAATCCATTCAGCACTTTCCGATGGGGACCAAAAGCCACTGGGCTACCAAGAAGTCGGATTCAGTTCA
GTCCCGTTTTCAAGATCCGGTTCAGTGTTTGGGGATGGCTTGGTCCAAGCCCACATCCATAGTAGATGGACTTGAGCAGGCAAGTATGCCACCTACTGAT
ATGATTGATTATGACAATTATGATATGGACTGGACGGTTGTGCAACCGATTGTACTGACTCGCTTACCCCCGAGAACACCTAAGACATGGGGGTTATTTA
CGCGAGTAAGCCTAGCAAGGACCAAG