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Detailed information on CNT3018049


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT001155, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549732Zea maysIpomoea triloba2.5923.0687.2186reverse complement
CNT30632355Zea maysVigna unguiculata9.9237.991.19329forward
CNT30390237Zea maysTriticum turgidum56.4186.5891.981871forward
CNT30589320Zea maysMusa acuminata10.9174.4985.91362forward
CNT30510815Zea maysSolanum lycopersicum7.7553.8889.11257forward
CNT30446760Zea maysSaccharum spontaneum34.0410099.111129forward
CNT30689226Zea maysTriticum urartu28.7951.5192.98955forward
CNT30558183Zea maysPanicum hallii7.6698.0797.24254reverse complement

Expression of CNT3018049

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKYLTKTGFHSTFLFLNNNFPHQLFRVFKVINCPIPLLYLDCMA*

>peptide 2 (35 aa)
MDRRGLVFFQEISSQPSPKRFFLTPMNYINARGKR*

>peptide 3 (31 aa)
MDKRDMDFPLSSNCLLFLLFGQEEKRYEIFD*

>peptide 4 (51 aa)
MLEENDSSKNFFVLNASYLEELATSTTFDGYKGIQSTNLMVVCYPNHSSQP*

>peptide 5 (38 aa)
MKRNFSIQSNRAMEFPSRCGCTCTAGIRKLAIHSVYFP*

Sequence

>CNT3018049
AAGGATTAGGTGCCTAACGGACATTGGTTATTCTGGAAAATTATTTCCCGACATAACAAAAAAATCTTTTTTTACGTTTTAATTTAAGAAGCTGGTGTAT
TTTTTTTCTGAGGGTATAAGCCCCTATCTACATCTACTTTCCTTGAGTGAGCATAATATAGATTTTTTGATTCGATTCAAAATTCCAAGATAACTCATTA
GAATTATTAATAAGACCGTCCTGATATATTAGGTAGGAATATTTAGATTGCCGATTTTTATGTACTTTATTACTTCTGTTCCAGAGCCTATCCCTATTGT
TTATCCTTATGAAATATGATATAAAATTGAAGGTAGAAGAAAGGGATATAATGAAATTCTTGATTTGATTTTCAACCAAACCACCCTTTTTATGAAAATG
GAGAGTGGTCTTATTCAAATTCAAAGCGCTTCGTAATCTTTAACCAGTTCTGTGCTTCAATATAATTTCCTGGAGTAAGCGCTATAGCTTGTTTCCAATA
CTCAGCAGCTTGATCAAACCAAGCTTCCGCAATTTCCGAATCGCCCTGTAGAATGGCCTGTTCTCCTCGGTTGGAATAGGCAGTTCCTTTCCCTAGAACC
GTACTTGAGAGTTTCCTACCTCATACGGCTCAGAAATTGCTATCTTAATTTCCCCTATCTTAACTGAATTCGATTTCTCAAAAATCAATCCAATTTCTTC
TTGGGTTAAGCAGAAGAAGTTAATTACCTAAGTTTCAAACCCTAATTTTGATCAATAATCAGTTTGATCTTTTCTCCCACCTTCAGAAGAATGAAGCATA
GATAGACCTATATCCTTCGTTCGAATTTTCTGAAAGGTAACTATCTCGGTTTCGTTTCTTTCATATATGAAATTTCTATAGAATCCTGGAAAAAGACCTT
TTTCCATAAGAAAGAAAAAAGAACTTACTATCTTTGGGATCTGATACTACACCGCTGCTTAATCCCTTAGTGGATCGGCTTTATTACATAAGCGGATTCC
TAAATTTTGTCCCATATCGTGGTATAATGAAGCAGTTTTTTTTAGTTGTATCGACCCAGTCGCTCACTAATTGATCTTTACGGTGTTTTCTCTATCAATT
TCAGCTTTATCCATAGAATAGTAGTATAGGCTCTACTTTCTTCCTATTTTGATTCTCGTGAAGTGTCCTTCCTTCCTACAGCTGATAGGGTAAAATCGTT
GTTTTGACGATCCCTATGTAGAAAGCCCTCTTTTCTAGTATTCACTAGAAAATTTCCTCCTTTCTTTTTTTTCTTCTTTCTATAGTGGAGATAGTCGCAC
GTAATGACAGATCACGGCCATATTATTAAAAGCTTGCGGTAAGAAGGGGTTTCGTTCTAGCGCCCGGAAATAATATTCCAAAGCCTTTGTATGCTCTCCA
TTGCTTGTGTGTATAAGGCCTATGTTATATAGTATATAACTTCGATCATAGGGATCAATTTCTAGTCGCGTAGCTTCATAATAATTCTGCAAAGCTTCCG
CATAATTTCCTTCGGATTGAGCCAACATCCGTTACGGTCGTTCATTCTATTCAAAAAATCTCCGTTCCAAAACCGTACATGAGGTTTTCATCTCATACGG
CTTCTCCCTTCTATACATAGTACTAAGCGAAAAATCTATAGAATAAAAATCGAATTAGTCCCATCTCATTATGGACCGAAGGGGGCTGGTATTTTTCCAA
GAAATCTCTAGCCAACCTTCCCCCAAGAGGTTTTTCTTAACACCAATGAATTATATTAATGCTAGAGGAAAACGATAGCTCCAAGAATTTCTTTGTTCTC
AACGCCTCCTATTTAGAGGAATTAGCCACTTCAACGACCTTTGATGGTTATAAGGGTATCCAAAGTACAAACCTGATGGTTGTTTGTTATCCCAACCATT
CTTCCCAACCCTGATACCAATCAGGAAAGGGCTAATTTCTAACAAAGTTTTTCTCTTGTTGATTCCTATTTCGTGGTGTAGTGCTTTTCTCCCCTATGCT
GCCTATTGGTACTAGTAGAGTCGGATTGCCCTGTAATACAGAACCTATCCTGTAGGTGTAACCTTTCGCTCAATACTCAAATCTACAATTGAAGCATCTG
AGGCCACATCAATCGAGGATACACGACAGAAGGAATTGTTAGTTCACCTCACCTTCCCCAAGCGCGGGTTTCCTTTACTAATTTTGTTCTCTCTATGCGA
ACCCTCTCTCTTTCTCGTAAGAATGAGATATAGGTAGGGCTAAAAAAAAAAAGAGTCAAATCGCACCATCTCTATAATAAGTAAATGCCCTTTTTTCCCC
GGAGGTTGTCGGAATTATTTGCAATAAAATATTGGCTACAATCGAGGAGGTCTTATCAATGAAATTTCCATTTATACGGGATCTAGGCATAATTCCCAAC
CCATTCTATATAGAATTCTTTTCATTCTATCACAAAATAACATAAAAACAAAACATTCGATTCTTATAAATCGATCCATATGCTCTAAATGGATAAGAGA
GATATGGATTTTCCGCTCAGCTCAAATTGTCTCCTTTTCCTTCTGTTTGGACAAGAAGAGAAGAGATATGAAATATTTGACTAAGACTGGATTTCATTCC
ACTTTCCTATTTCTCAACAACAACTTCCCTCATCAGCTATTTCGCGTTTTCAAAGTCATTAATTGCCCCATACCCCTTTTATATTTAGATTGTATGGCGT
AATGTACCTTATGCAAATGGAATTCTAGGGTTCCTTTATTTTCTTATGGAATAAGAAGAATTCTTCCATTCTCTTTTTATTTTGGTTTTCCCCAAAGAAA
AACTTTTCGAGGGAGCAGAATTCCTAGTAAAAAAATACAGGATCCTTCCACTTAGATGAAAAGGAATTTTTCCATCCAATCCAATAGAGCCATGGAATTC
CCGAGCCGTTGTGGCTGTACCTGTACTGCAGGAATACGAAAACTCGCTATTCACTCAGTTTATTTTCCATAATAAGATTATGTAGGAGAGATGGCCGAGC
GGTTCAAGGCGTAGCATTGGAACTGCTATGTAGACTTTTGTTTACCGAGGGTTCGAATCCCTCTCTTTCCGTTTCTCTTAATTCATCAATGTTAGCGATC
ACAATGTATCAAATTAAATAACAATTTATTCCAACAATAATACCTTTAATTAATAGAAATTCTCTATAGCAAATTACTGTGGTATGTAAAATACACATCG
AGGAAATAACAAAAAAGAAAAAAGTATCCTAGGGTTAATCTATTTCTGCTAGGTGAACGGGAAAATACGAATTAAGAGCCTTAGGTCGATTTAGTTCGGG
GAAAGGGGAAGGGGAAA