CANTATAdb - search

Detailed information on CNT3018020

BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENW6|ATPA_SACOF, E-value = 0.0

BLAST vs NONCODE:
NONCQUT004980, E-value = 2e-78

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696665	Zea mays	Oryza sativa	57.23	41.65	94.82	2356	forward
CNT30703171	Zea mays	Quercus lobata	36.46	12.59	85.21	1501	forward
CNT30201764	Zea mays	Pisum sativum	17.08	93.61	86.06	703	forward
CNT3095993	Zea mays	Solanum tuberosum	21.74	22.36	83.8	895	forward
CNT30301052	Zea mays	Triticum aestivum	36.05	60.01	95.22	1484	forward
CNT30220359	Zea mays	Hordeum vulgare	21.16	83.35	94.37	871	forward
CNT30554216	Zea mays	Oryza glaberrima	15.3	96.63	94.92	630	forward
CNT30440667	Zea mays	Aegilops tauschii	6.07	47.98	83.2	250	forward
CNT30660677	Zea mays	Triticum dicoccoides	22.08	68.14	93.29	909	forward
CNT30353938	Zea mays	Eragrostis tef	14.02	99.31	94.45	577	forward
CNT30364932	Zea mays	Sorghum bicolor	9.67	60.21	92.21	398	forward
CNT30371010	Zea mays	Oryza glumipatula	20.77	93.54	93.45	855	forward
CNT3057982	Zea mays	Amborella trichopoda	11.37	26.96	86.75	468	forward
CNT30121210	Zea mays	Citrus clementina	35.78	37.82	85.34	1473	forward
CNT30148014	Zea mays	Brachypodium distachyon	6.8	99.29	94.64	280	forward
CNT30103672	Zea mays	Oryza rufipogon	6.87	32.42	95.41	283	forward
CNT30575833	Zea mays	Oryza barthii	11.39	70	91.04	469	forward
CNT30604314	Zea mays	Oryza punctata	2.53	38.52	99.04	104	forward

Expression of CNT3018020

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MNWAKLKKERLFQKLVNSMMTFHGFTYIGCG*

>peptide 2 (46 aa)
MLYLCLFLKGKPFKLFLNSFLQKGFCLLGECLTRRYNFLELRFSIF*

>peptide 3 (28 aa)
MTGIGTTKGTKETRTTTTNSSANIFPKSR

>peptide 4 (40 aa)
MAPRMPILARIVRKCNSVFKQLFRVPRAPCTACWKTRCRT*

Sequence

>CNT3018020
ATAAAAAAGAAAGAATAAAATAAGAAAGAGAAGCGTCCATTGTCTAATGGATAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATCCTATTGGA
CGCAATCTTTTTTCTATCTATTCTTTAAATAACTATACTAAAAACGAAAAAAAATTTTGCATGATTCAAATGAAAAATCTTTGATTCCTCTTCTACTAAC
ACGAGTTATACTAATAAGAGTAGACATGCTATATTTATGTTTGTTCCTGAAGGGAAAACCGTTCAAGCTGTTCCTGAATAGCTTCCTTCAAAAGGGTTTC
TGCTTGCTCGGTGAATGTCTTACTAGAAGATATAATTTCTTGGAATTGAGGTTTAGTATCTTTTAGGTGTTTACGTAACTCATCCAGAAATTTCTTTACC
TGTTCAATTTCTAACGAATCAAGATATCCTCTCGTTCCGGTATAAATAGTAGCTACCTGCTCTTCCACTGGGAGAGGGTTTGATTGGGATTGTTTAAGCA
ATTCCCGTAATCGTCGACCCTGCCAATTGATTCTGACTTGTTTTATCCAGAGCGGAGGCGAATTGTGCAAAGGCTTGTAATTCTGCGAATTGAGCTAGTT
CCAATTTTGATTTGCCAGCTACTTGTTTCATGGCTTTAATTTGAGCTGCGGATCCTACTCTGGAAACTGAAATACCCACATTAATAGCAGGTCGAATTCC
GGCATTGAATAGATCCGCGGATAAGAATATTTGTCCATCTGTAATTGAAATTACATTAGTAGGAATATAGGCGGAAACGTCTCCAGATTGAGTCTCCACT
ATTGGTAAAGCGGTCATACTCCCTTCGCCTAAAAGAGAATTTAATTTAGCGGCTCTTTCTAAAAGGCGTGAATGCAAATAAAAAACATCCCCTGGATAAG
CTTCGCGGCCGGGAGGTCTTCTTAATAGAAGGGACATTTGGCGATAAGCTTGTGCCTGTTTGGAGAGATCATCATAAATTATTAAGGTATGCCGTTCGCG
GTACATAAAATACTCAGCCAGGGCTGCTCCCGTATAAGGAGCGAGATATTGTAATGTAGCGGGTGAATCCGCCATTTCAGCTACTACAATAGTGTATTCC
ATGGCCCCCTCTTCGTGGAAAGTAGTTACTACTTGAGCCACGGAGGATGCTCTTTGACCGATAGCTACATAAACACATATTACATCTTGACCTTTTTGAT
TGAGAATTGTATCTGTGGCTACTGCTGTTTTGCCAGTCTGTCTGTCCCCAATAATTAACTCTCGCTGACCGCGCCCTATGGGGATCATCGAATCGATAGC
AATAAGCCCTGTTTGAAGGGGTTCATATACGGAACGCCTAGAAATTATACCCGGAGCAGGAGATTCAATTAAGCGAGATTCTGAAGCGACAATTTCGCCT
CTCCCATCAATAGGTTTAGCGAGAGCATTTATAACACGACCCAAGTAAGCCTCGCTCACGGGTATCTGAGCAATTCTTCCTGTTGCTTTTACAAAACTTC
CCTCTTGTATCATCAACCCATCGCCCATTAATACAATCCCAACATTTTTAGATTCCAAATTCAGAGCAATACCTCTCGTCCCTTCTGCAAATTCGACTAA
TTCACCTGACATTATTTCACCAAGACCTATAATACGAGCAATCCCATCCCCCACTTGCACTACGCGACCGATATTCTCAATCCCTACTTTCCTATTATAT
TGTTCAATACGTTCGCGGAGAATTTTATTAATTTCGTCGACTCGAAGGGTTGCCATTAGTGTTTCTTTAATTTTTTTTTTTTTTGGAAGCAAGGGAAAAT
AATGCCTAAATTCTAAACAAAAGTAGAAGTTCAAAACCTAATAAATTGAATTATCTCTTCCATTCTATGGCCCCGAGAATGCCAATATTAGCACGAATCG
TACGGAAATGTAACTCGGTATTCAAACAACTATTCAGAGTTCCTAGAGCTCCTTGTACAGCTTGTTGGAAAACCCGTTGTCGGACCTGATTCATCGCCCT
TTGTTTTTCAAAATAAAGGGTTTCGTTTTTAGACTTTTCTAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTTCTTTTTCTCGTTCTATTTCA
GAGTATCCATTCATTCGATACTCATCTGCTTCCAGTTCGACTTTCTGTAATCGAATACGAGCTTTTTCGAGTTGTTCAAGGGTCCCTTTACGCAATTCTT
CCGAATTTCGAATAGTACTTAAAATCCTCTGTTTTCGATTATCTAATAAATCTTTTAACACTCCCTTTCCAAAAAAAATCAATACACCAACCACTACAGT
TAGATTTATTAGATTTGTTGCTAAAATATCGGTATTAAGCCCGAAACTCCCAGCGAATGGCCAGTGAGCTAAAAAAACAAAAGAATGGGTTACATTTTTC
ATATGCTCTCCTCTTATAGATAGGACGAACAAAGAAGAAAGTTTTTCGATTACTTACTTCGCTCGTCCTTTTTTGATCGGTTTTTTTAATGCAAATAGAT
TCAATCTAATAATTTCTTTTAGATTAAGTCTTAGGTCTCGTTTGACCTGTGAAAGATCTCCTTTGTTGAAATGTTCCCAAAATTCCTAAAATAAAAGGAA
AAATACTTTCCACTGTCCTAAACTAAGGACGGGAAGGAAGAGGGCGAGCATATCCTCTAAATTGATCATGCTCAAATCAGCCCTTCTTGGGGTTCCTAGG
GTATTGTCTGTCCCGATAAATACAAAATTTCCGGAATAATATAAAAAAGAAATAATATAATAAATAGGAGTAAAGTAAAGTATTGATATACTTAGAATTA
CATAAGCAAATGCCAATGTACTAAAAAAAGAAAAAAGTATCTAATCTAAAGGACTCATTTTCTTTTTTAGGATTAAACAAAAGGGTTCGCAAATAAAAGC
GCTAGTGCCACAACCAGTCCATAAATTGTTAAAGCTTCCATAAAAGCTAGACTAAGCAATAAAGTACCTCTTATTTTACCTTCTGCTTCTGGCTGTCTCG
CAATACCTTCTACAGCTTGTCCTGCAGCAGTACCTTGACCAACTCCGGGCCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACGGAAGCAGC
AGCAATTAGTGGATTCATGATGAGTTCCTCGTGTCAAAAAAAAAGAAATGGTTAAGGATACAATCAACCAAGAAATTATTACTTCCAACTTCTAAGCTCT
ATCGGGTAGAAGTAACTAATAAGTACAAATAAATGATAATCGAAATCGTTCGAATTACTTCGAGATCTCGTTTTTAGTTTCTAATCATTAGAGGTTTGTG
TAAATCCATATGATTCTCATTATTCTATTTCTCTTTCTTTTCAACCAATCACTCTTTTATTCCATCCTTTTTTTTACTCTTCGATATCTTTGAGTTCCCA
TTTTTTCCCCTTCATCTAACATAATAAAAGACGAAATACAGGAAGAACCCCTATTGAAATCGAACTAATCCAAATCCAATAGGAATCAAATCAAGATATA
CAATTGATAACAATATGCTGCATAGAACTAGATATGGAATCCAGTTCCATATAGAAGGGAATTCTATATATCGGATTAGATAATGAATCTAACTTAGGAA
TAAAAAAAATCCCATATACATTTGTTTCTTCTATTTTGTTTGCCTATTTTCTCATTTTCTATTGAATCCGATTCTAAAATCATTCTTTAGAAAGCCACAC
AAAAGATGACTGTCTTATAGGCATTAAAGATATAGATCTAACCTGACTTGGCCCCCCTGAATGCATATATACTTTACCTCTTCCATAATATAGTCTATTC
TCTCTCCTACAACTCTAGGTTGTATATTCATACGCCTTTCGAACTATTTAGTTTTCCAACTAAGAGGATTATCCGGAATCATGCATGAATTGGGCTAAGC
TAAAAAAAGAAAGACTATTTCAAAAACTAGTTAATTCAATGATGACCTTCCATGGATTCACCTATATAGGCTGCGGCTAACGTTGCAAAAATAAGAGCTT
GAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGACTACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATAT
ATTTCCGAAAAGTCGAA