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Detailed information on CNT30180109


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30289432Secale cerealeTriticum aestivum38.3738.3785.97221forward
CNT30387005Secale cerealeTriticum turgidum30.214.7788.51174forward
CNT30657813Secale cerealeTriticum dicoccoides35.2420.6794.58203forward

Expression of CNT30180109

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MVSYMRIPTPFDVSSLANICIVLRPIILKQRFWRQRGRSSGCVR*

Sequence

>CNT30180109
GTGACATGGTGATATCAGGCAAATTAACCTCTTAGCATGTGAGCTTCTAAAGAAGTATGAGCTAGAGGCAGAACAGGTCTGGAAACTCGTTATTCCTGCT
GGAAGAAGATTTCGCGTGGCAGTAGAAGGTTGCAGTTTGTCTCAGTTTGATGCAGAACTGTAATTTGGGCTTCATCTTACAAGTTTCAATATAGACTGAA
GGATTTGTATGTGTTGTGAATCTTGTTCAGAAGATGGTCACAGGTTCAAAGGATACTAGGATTCGGATAGGAGCTGTGCGCACAAGAGCTCTTTTCAAAT
GGTTTCCTACATGAGAATTCCTACCCCGTTTGATGTTTCTTCTTTGGCCAATATTTGCATCGTCTTGCGGCCTATAATCCTCAAGCAAAGGTTTTGGCGA
CAGCGTGGGCGATCCAGTGGGTGCGTCAGATGAATTTCAAATCCCAGTGTGTGACCATGTGCTTCATCAACATTTTTTTGCGGGTATGAACAAATAACTG
GGAGGCCTCGAAAATTTGGCTAAGCTGTGGGGGTGCAGAGCGGCACCTGATCCGCCCGCTTCGCAGGCGAAATAAG