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Detailed information on CNT30178690


BLAST search results

BLAST vs Swiss-Prot:
sp|P25776|ORYA_ORYSJ, E-value = 2e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30135672Secale cerealeLolium perenne11.8450.6483.9118forward

Expression of CNT30178690

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MLAGEVTEDVEVFLEHRVPVLLLVDGAVVLLEPGHPVPEHPAGLHLLAPLIVRYGRRQRQRQQQQRRHHESRGPPHPRNATTGRRRRSVVWGIAF

Sequence

>CNT30178690
GTTTCACTTTGGAAAAAAGGACCGGAGCACCATACTTGGAAATAAGTGGGAGTAGAGGAAACTAAACCTATTAATGATCTCATATCCTTAAAAATATATT
GCATATCTCACAAAAAAAGGGGCTGAACAAATTGCATAGATCTAAACAAGGAAAGGTTTAGAAGAGTTAGCCAAATATAAGCTGTAGTAGAATTACATTA
TTTGTAATGGATGATGCTTTAGAGCGTAGCGTGTAGATTCATGTGACAACAAGGAAGAGAAACATTGGTTCAACCATACTAATAATAACTGAAACGCTAA
TTCAAAAAAATAAAATAAAAAATTAGGCAGAACCTCCCCTGTATTTTGATGCCATATCCCCTGCACACAGTTTATATGTATATAATCGATTGAACAAAAC
AAGGACCATAAACAACCAGATTCACACATTGCACCAGGGGCAAAAGTGACTTTGTATGTGAAGAGTTGACACCATTAGCTCTAAAAATACACTAGAGGCA
TAAATTTTACACAAGTGACCATAGAAGGAAGAAAAAAATTGGAAGTGTCACATAAGGCATCAAATTTAAGGGTAGTGTCATATAAGGAATTCTCTCTACA
TTTATCCAGTAGAGGAGGGAGTACTTGTGGCCGCCGTCCCCGTGCGTGCACCCGGTGTACAATACGCGGAGCTCCTCGTGGGTGAGGTCACCGAAGACGT
TGAGGCCCCCATGCTCGCGGGTGAGGTCACCGAAGACGTGGAGGTTTTCCTTGAACACCGCGTACCGGTGCTCCTCCTCGTCGATGGAGCTGTAGTTCTT
CTCGAACCTGGTCATCCAGTCCCTGAACATCCTGCGGGTCTCCACCTCCTCGCTCCTCTCATCGTGCGGTACGGCCGTCGCCAGCGACAACGCCAGCAGC
AGCAGCGCCGACACCATGAGAGCCGTGGACCTCCTCATCCCCGCAACGCAACCACGGGCCGGCGGCGGAGATCTGTGGTGTGGGGGATCGCTTTTCC