Detailed information on CNT3017865


BLAST search results

BLAST vs Swiss-Prot:
sp|P31156|METK2_PETCR, E-value = 5e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729048Zea maysCorchorus capsularis38.7413.1188.3786forward
CNT30524774Zea maysPhaseolus vulgaris29.288.9786.1565forward
CNT30225935Zea maysHordeum vulgare83.3342.2488.65185forward
CNT30218668Zea maysKalanchoe fedtschenkoi57.2132.8285.83127forward
CNT30551132Zea maysOryza brachyantha83.3347.9391.35185forward

Expression of CNT3017865

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MMIMPGLKSKFSFTIFRISLSGIAPVPYVSTNTERGS

>peptide 2 (72 aa)
SCRRRLLRLEGLHHLPGEVGVVPPKVPVGRRLEVEVDDDHAGPEVEVLLHDLQDLLVGDRAGAVRVHEHRKGL

Sequence

>CNT3017865
CTCATGCAGAAGACGGCTTCTCCGCCTTGAGGGGCTTCACCACCTCCCAGGTGAAGTCGGGGTCGTCCCTCCCAAAGTGCCCGTAGGCCGCCGTCTTGAG
GTCGAGGTTGATGATGATCATGCCGGGCCTGAAGTCGAAGTTCTCCTTCACGATCTTCAGGATCTCCTTGTCGGGGATCGCGCCGGTGCCGTACGTGTCC
ACGAACACCGAAAGGGGCTCGG