Detailed information on CNT30176739


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632205Vigna angularisVigna unguiculata83.541.4886.43258forward
CNT3085911Vigna angularisVigna radiata100.329.5592.9310forward
CNT30715637Vigna angularisMalus domestica golden25.8928.0787.580reverse complement
CNT30154558Vigna angularisPrunus persica27.8328.186.0586forward
CNT30319113Vigna angularisAsparagus officinalis25.899.9487.580reverse complement
CNT30726065Vigna angularisLupinus angustifolius48.5448.786.67150forward

Expression of CNT30176739

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (41 aa)
PSWVTSAYDLSGGNKMIEQGYGLLSWTGGCNLLACPLQVES*

>peptide 2 (47 aa)
MSPLRRHGFPGLLDRRAPRQAGFTEQRQPPVLDSGGITGCCTSCPTK*

Sequence

>CNT30176739
GCCGAGCTGGGTAACGTCAGCTTATGACCTGAGTGGGGGCAACAAGATGATTGAACAAGGCTATGGCCTGCTAAGCTGGACCGGAGGTTGCAACTTGCTG
GCTTGCCCACTCCAAGTTGAGAGTTGAGTCATGAGTCCTTTGCGAAGGCATGGGTTTCCTGGTCTCCTAGACAGGAGGGCACCGCGTCAGGCTGGTTTCA
CAGAGCAGCGACAACCTCCGGTTCTTGACAGTGGAGGGATAACAGGCTGCTGCACCTCCTGTCCCACCAAATGAGCTTGGTGAGCCCTTGCCCTTGAACA
ATCATTTTT