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Detailed information on CNT30176592


BLAST search results

BLAST vs Swiss-Prot:
sp|P46293|RS16_GOSHI, E-value = 6e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696918Vigna angularisOryza sativa23.1937.8885.71189forward
CNT30515426Vigna angularisJuglans regia50.4331.2886.37411forward
CNT30615807Vigna angularisSesamum indicum12.0244.7583.6798forward
CNT3043803Vigna angularisPrunus dulcis16.3225.3885.71133forward
CNT30391876Vigna angularisTriticum turgidum10.1837.0585.5483forward
CNT30568235Vigna angularisActinidia chinensis26.9973.5888.64220forward
CNT3083729Vigna angularisVigna radiata78.5369.1995.47640forward
CNT30555554Vigna angularisOryza glaberrima22.2122.1587.29181forward
CNT30438780Vigna angularisAegilops tauschii25.2825.6583.5206forward
CNT30247768Vigna angularisAvena sativa25.5234.2181.73208forward
CNT30663140Vigna angularisTriticum dicoccoides25.1529.7184.39205forward
CNT30472632Vigna angularisSaccharum spontaneum25.034.1785.29204forward
CNT30136796Vigna angularisLolium perenne25.1530.0182.93205forward
CNT30232050Vigna angularisAnanas comosus30.9222.1282.14252forward
CNT30625853Vigna angularisDaucus carota50.832.2480.92414forward
CNT30620437Vigna angularisCajanus cajan19.2622.0291.72157forward
CNT30431542Vigna angularisPapaver somniferum27.6127.1179.11225forward
CNT30120766Vigna angularisCitrus clementina25.7738.8281.43210forward
CNT30151249Vigna angularisBrachypodium distachyon16.8126.381.75137forward
CNT30104226Vigna angularisOryza rufipogon11.7820.0887.596forward
CNT30581659Vigna angularisEchinochloa crusgalli22.2128.1183.43181forward
CNT30117820Vigna angularisOryza nivara25.0326.1586.27204forward

Expression of CNT30176592

Peptides detected in this lncRNA

>peptide 1 (29 aa)
KSYFQSKIKNIKESIQTIIFKLTTELKLS*

>peptide 2 (46 aa)
MRMSTPAKRWRPRRRMGSKALKRRISGSTSSIGHPLILIRPRPRLQ*

>peptide 3 (59 aa)
MLVVTATAVFLRPKHWTCSNAGGVCAILALRVWFSLTAPHSGNLSVIPNVYGFIYSSTD*

>peptide 4 (46 aa)
MSTTLDTDAHVNAGKTVAAEEEDGLESLEAEDLRLHKLNRTSVDLD*

Sequence

>CNT30176592
CAAGAGCTATTTCCAATCAAAAATTAAAAATATAAAAGAGAGCATCCAAACAATTATATTTAAATTAACGACAGAACTAAAACTTAGCTAAAACATTATA
TAAGAGTATCCAAAATCCGATTAAAAACTCAACGAAACACAAAAAACAGAGAGTACTATCAAGACATTTCGATAAAATATAAAGAAAAGGGAAAAGGGAC
TGAAATCAACGGTAGGATTTCTGGAACCTGGCGCGGGCACCGCGACCACCGAACTTCTTGGGCTCGCAGCGGCGAGGATCGGCAACGAGGAGTGTGCGGT
CGTACCTGACGAGGATGTCTTTGATCTCCTTCTTGGACTGCTCATCGACGTACTTCTGGTAATAGGCGACGAGAGCCTTGGCGATGCTCTGACGGATGGC
ATAGATCTGGGAGGTATGTCCACCACCCTTGACACGGATGCGCATGTCAACGCCGGCAAAACGGTGGCGGCCGAGGAGGAGGATGGGCTCGAAAGCCTTG
AAGCGGAGGATCTCCGGCTCCACAAGCTCAATAGGACATCCGTTGATCTTGATTAGGCCGCGGCCGCGCTTGCAGTAGGTGACTGCCACCGCCGTCTTCT
TACGGCCGAAGCACTGGACCTGCTCTAATGCTGGTGGTGACTGCCACCGCCGTCTTCTTACGGCCGAAGCACTGGACCTGCTCTAATGCTGGTGGTGTCT
GCGCCATCTTAGCACTTAGGGTTTGGTTTTCTCTCACTGCGCCTCACTCAGGAAACCTATCTGTGATTCCTAATGTTTATGGCTTTATATATTCATCTAC
GGATTAGGGCTTTTG