Detailed information on CNT30176501


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3089273Vigna angularisVigna radiata87.0579.2593.42699reverse complement
CNT30143656Vigna angularisMedicago truncatula24.2817.6282.05195forward
CNT30646316Vigna angularisCannabis sativa26.7756.4384.65215forward

Expression of CNT30176501

Peptides detected in this lncRNA

>peptide 1 (36 aa)
EKGVENGVYLEAGAILQNARTSNFGESKLDVRSNGA*

>peptide 2 (36 aa)
MHFGDMSSQINSFKLSFNCIVPYLHSLQIPLIPVYV*

>peptide 3 (43 aa)
KKGLKMGFIWKLVRFCRMRVRPILVSQNWTFVPTVLNHGVLMG*

>peptide 4 (39 aa)
MLLAPASLPALVFVPGCHMPTSFCSGSSSNHTVLGEARL*

>peptide 5 (61 aa)
MSDSSMYPFHPKLPGAAPCLCPLHHASCTGVTPRPRLRARVSHAHQLLLWFVLEPHRTGRG*

Sequence

>CNT30176501
GGAAAAAGGGGTTGAAAATGGGGTTTATCTGGAAGCTGGTGCGATTCTGCAGAATGCGCGTACGTCCAATTTTGGTGAGTCAAAATTGGACGTTCGTTCC
AACGGTGCTTAACCATGGAGTTCTTATGGGCTAGGCTACCGAAAAGCAAATGCATTTTGGTGATATGAGTAGTCAAATCAATTCCTTTAAGCTATCCTTC
AACTGTATAGTCCCATACCTACACAGTCTCCAGATCCCTCTCATTCCGGTGTATGTCTGATTCGTCCATGTACCCCTTCCACCCGAAGCTGCCAGGAGCC
GCTCCTTGTCTGTGCCCCCTGCACCATGCTTCTTGCACCGGCGTCACTCCCCGCCCTCGTCTTCGTGCCCGGGTGTCACATGCCCACCAGCTTTTGCTCT
GGTTCGTCCTCGAACCACACCGTACTGGGAGAGGCTAGGCTCTGATACCATCTGTAACGCCCCGGCAACTCACAGGGACCATCGACTGCCCCCACAGATC
ACCACCAGGCTTTCCAGTGTGCTTTGTCCTCACTCGCACACTTTCCGGGAAAACTTCCCAGAAGGTCACCCATCCCAGAATTGCTCCAAGCTAAGCACGC
TTAACCATGGAGTTCTTATGGGCTAGGCTACCGAAAAGCAAATGCATTTTGGTGATATGAGTAGCCAAATCAATTCCTTTAAGCTATCCTTCAACTGTAT
AGTCCCATACCTACACAGTCTCTAGATCCCTCTCATTCCGGTGTATGTCCGATTCGTCCATGTACCCCTTCCACCCGAAGCTGCCAGGAGCCGCTCCTTG
TCT