Detailed information on CNT30176450


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 1e-93

BLAST vs NONCODE:
NONSTUT001005, E-value = 2e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381257Vigna angularisManihot esculenta41.9167.285.03461forward
CNT30525067Vigna angularisPhaseolus vulgaris5590.9887.77605forward
CNT30628664Vigna angularisVigna unguiculata59.3654.9285.91653forward
CNT30157672Vigna angularisPistacia vera39.4541.8187.1434forward
CNT3088000Vigna angularisVigna radiata65.4564.5795.28720forward
CNT30620193Vigna angularisCajanus cajan42.4572.7491.65467forward

Expression of CNT30176450

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVIVFPVRVLTNICIPPRRRRTRWRVDSFWML*

>peptide 2 (88 aa)
MEGGLLLDVVVSQGATILQLLPGEDQTLLVWWDPFLVLNFGLYVVDGVGTLHLESYGLTSQGLNEDLHLHRHTQPTDESKTNQHKNLN*

>peptide 3 (52 aa)
QILNFKADEIDINGLQKLLIAIKMKQIYLTGQQRPIQSKVLNLKTTAEKEEL*

>peptide 4 (49 aa)
MVSELSTSRVMVLPVKVLTKICICTVIPNQQMNQKQTSIRILIRIIGQI*

Sequence

>CNT30176450
CAGATATTAAATTTCAAAGCGGATGAAATTGATATTAATGGATTACAAAAGTTGTTGATAGCGATAAAAATGAAACAAATTTATTTAACGGGCCAACAGA
GACCCATACAGAGCAAGGTGTTAAATTTGAAGACAACAGCCGAGAAGGAGGAGTTATAGCACTTAAAAACCACCACGAAGACGCAGGACAAGGTGAAGGG
TTGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTT
GTCCTGAATCTTAGCCTTCACGTTGTCGATGGTATCTGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCGGTAAGGGTCTTGACGAATATCTGCATTCCT
CCACGGAGACGGAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGACCATCCTCCAGTTGCTTCCCGGCGAAGATCAAAC
GCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATTTTGGCCTTTACGTTGTCGATGGTGTCGGAACTCTCCACCTCGAGAGTTATGGTCTTACCAGT
CAAGGTCTTAACGAAGATTTGCATCTGCACCGTCATACCCAACCAACAGATGAATCAAAAACAAACCAGCATAAGAATCTTAATTAGAATAATTGGCCAA
ATTTAGGGCTCAACTCCAGATCAAAATCACGATCTCAAACACAAAACAGAAAATAAAGCATCACACACACAAAAACTGAGAATCTTAATTAAAATAATTT
ACATATTCAAAACTGAAAATTCGAAGCCCGGAAACATTAAGAACGTCCATAACATTTCCTTTATCAGGTTTAAAAGGCAGAAGCGAACAGGATTCATGTT
CGCAGAACCATACACAAGTTGCCGTAAAATTAAAAACCTAACAGATTCTTCAGATGCATAAAAACCCAAAATATTGAATTGCAGATAGATGATTAAAACT
TCAATGAAAAATTAGGAGGCTTAAGCGGAAGATTTAAGAGAAGGAGGAGAGGAGAAACACACCTTGAAGGATTTGAATGAACCGAAACTATAGAAATGAG