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Detailed information on CNT30176337


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 5e-115

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548768Vigna angularisIpomoea triloba25.4469.5487.98258forward
CNT30514020Vigna angularisJuglans regia22.6825.9987.83230forward
CNT30373848Vigna angularisArabidopsis thaliana23.5722.8388.7239forward
CNT30525058Vigna angularisPhaseolus vulgaris25.9450.9796.2263forward
CNT30629403Vigna angularisVigna unguiculata34.7148.8995.45352forward
CNT30504488Vigna angularisNicotiana attenuata23.0848.5586.75234forward
CNT3092339Vigna angularisSolanum tuberosum25.7444.3987.36261forward
CNT3088186Vigna angularisVigna radiata47.2443.9496.66479forward
CNT30544802Vigna angularisBrassica napus23.2734.688.14236forward
CNT30145117Vigna angularisMedicago truncatula23.0825.4388.89234forward
CNT30310534Vigna angularisCamelina sativa23.3720.0289.03237forward
CNT3078263Vigna angularisBrassica juncea23.5730.7287.45239forward
CNT30610069Vigna angularisGossypium raimondii25.4458.589.92258forward
CNT30714756Vigna angularisMalus domestica golden25.5425.5288.03259forward
CNT30621216Vigna angularisCajanus cajan21.428.4494.47217forward
CNT3055166Vigna angularisAmborella trichopoda25.1531.4886.67255forward
CNT30119285Vigna angularisCitrus clementina25.6429.0888.08260forward

Expression of CNT30176337

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLTLPTSGADGASLTALPAKEGDESAMEEAAAIVPKNFPFSLCSVL*

>peptide 2 (43 aa)
MAWTKNPNMENMANLPFLSSLTLSSAKASGSSARPNGSKLPPG*

>peptide 3 (34 aa)
NNGRVKIMTSNMFLLPELRNRSSNWWRQEKRKKT*

>peptide 4 (28 aa)
MRVPWRKQQPLFQRTFLFLCALCFEVWEL

Sequence

>CNT30176337
CAATAATGGTCGAGTTAAAATTATGACCTCAAACATGTTTCTTTTACCGGAATTAAGGAATCGAAGTTCAAATTGGTGGCGACAAGAGAAGAGAAAAAAA
ACGTAAAATAGAGGAGAAGATGGAAATTTGTAAAAAGCAAGTAACATTAAGTTGGATCGGATACACAAGATGATTCACATTATCTGAAGTACATTGCAAT
AACATATACTTCAACAAACAGAAATCTAAAACTCTCGAGGGCACAAATCATTCTGTTGACGCTCACTTTCCGGGGACGAAGTTGGTGGCGTAGGCCCAGG
CGTTGTTGTTGACTGGGTCAGCAAGGTGGTCAGCGAGGTTCTCCAATGGTCCCTTTCCGGTGACAATGGCCTGGACGAAGAACCCGAACATGGAGAACAT
GGCCAACCTACCGTTCTTGAGTTCCTTAACCTTGAGCTCAGCGAAAGCCTCTGGGTCGTCAGCGAGACCCAATGGGTCGAAGCTGCCACCGGGGTAAATG
GGGTCAGTGACCTCACCGAGAGGATGACTTGGGTGGCCCAGATGGCGAGGATGCTCTGAGCGTGGATGAGGCTTGGGTTGCCCAAGTAGTCGAGCCCACC
CTCGCTGAAGATCTGGGAACCAGCTTTGAACCACACGGCCTCGCCGAATTTCACGCCGTTGCGGGACAAGAGTTCGGGGAAGACGCAGCCCAAGGCTCCG
AGCATGGCCCACCTGGAGTGGATGACTTCCAACTCACGGTTCCTGGCGAAGGTCTCTGGGTAGGACGGGGGCTCGCCGGAGAATGGGCCCAAGTACTTGA
CACGGTCTGGGCCGTACCATGGGCTTCCGGAGGAAACCTGCTTGGTGACGGTCTTCCTCATGCTGACCCTCCCGACTTCGGGGGCTGATGGGGCAAGCTT
GACGGCCTTGCCAGCCAAGGAGGGGGATGAGAGTGCCATGGAGGAAGCAGCAGCCATTGTTCCAAAGAACTTTCCTTTTTCTTTGTGCTCTGTGCTTTGA
GGTGTGGGAGTTGT