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Detailed information on CNT30176196


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004400, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640023Vigna angularisNymphaea colorata80.7135.9794.231213forward
CNT30519036Vigna angularisJuglans regia98.0747.6793.961474reverse complement
CNT30619307Vigna angularisSesamum indicum81.5773.1994.051226reverse complement
CNT30730400Vigna angularisCorchorus capsularis86.5698.1193.71301forward
CNT30632331Vigna angularisVigna unguiculata97.6743.3597.551468reverse complement
CNT30202310Vigna angularisPisum sativum97.6756.1896.191468reverse complement
CNT30711221Vigna angularisGlycine max81.5789.7598.371226reverse complement
CNT3047206Vigna angularisPrunus dulcis81.6465.295.111227reverse complement
CNT30163337Vigna angularisPistacia vera77.5184.1894.511165reverse complement
CNT30383474Vigna angularisTriticum turgidum80.5771.7893.721211reverse complement
CNT30540266Vigna angularisBrassica napus81.4463.5593.951224reverse complement
CNT30217525Vigna angularisKalanchoe fedtschenkoi98.2782.3389.981477reverse complement
CNT30653443Vigna angularisRosa chinensis87.2399.6292.451311reverse complement
CNT30355986Vigna angularisLactuca sativa97.9453.9289.541472reverse complement
CNT30574469Vigna angularisVitis vinifera79.9165.5296.341201reverse complement
CNT3023562Vigna angularisPopulus trichocarpa97.8765.9194.221471forward
CNT30558388Vigna angularisPanicum hallii80.5187.1193.311210reverse complement

Expression of CNT30176196

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MCRPSQTPHLTMSSARIDRPKPTLGPKRGAAPRLRFTE*

>peptide 2 (38 aa)
MIGRADIEGSKSNVAMNGWLPQASYPCGNFSDTSSFKF*

Sequence

>CNT30176196
TTCGTTTAAAATGTAGGGGAGGGACGAATCAAAGCGACAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCG
CGTATTTAAGTCGTCTGCAAAGGATTCTACCCGTCGTTTGATGGGAATTGCGCTTCAAGGCGTCTCATAAGGCTTATTCACCTTACAAGGTTCACCAACG
GCACGTGCCGCTGGGGGGCAAAGCCCCCTACTGCTGGTCGGCAAACAAACGACAGGCACACACATCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCA
GTCATAATCCAACGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGTGAATCAACGGTTCCTCTCCTACTAGGTTGAATT
ACTATTGCGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGATGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTT
GGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAATGTCGCTATGAACGGTTGGCTGCCACAAGCCAGTTATCCCTGTG
GTAACTTTTCAGACACCTCTAGCTTCAAATTCTGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAAC
GAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTTATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAAC
TCCCCACCTGACAATGTCTTCCGCCCGGATCGACCGACCGAAGCCGACCTTGGGACCAAAAAGAGGGGCAGCGCCCCGCCTCCGATTCACGGAATAAGTA
AAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCTGTTTCCAGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC
TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCATTAATCCA
TTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAACAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT
TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGT
ACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGAGGCCCCGAAGGGCCCGTTCCCAATCCGTTCCCCGACCGGCACGCGACGACCCGGTCTCGCCGC
GGGAGCAGCTCGAGCAGTCCACCGACAGCCGACGGGTTCGGGACTGGGAACCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTCACTTTTGCA
CGC