« Back to Vigna angularis search


Detailed information on CNT30176058


BLAST search results

BLAST vs Swiss-Prot:
sp|P25698|EF1A_SOYBN, E-value = 4e-67

BLAST vs NONCODE:
NONGMAT001702, E-value = 1e-110

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629687Vigna angularisVigna unguiculata76.0834.7896.22687forward
CNT30721805Vigna angularisTriticum spelta24.8115.5186.61224forward
CNT30423983Vigna angularisPapaver somniferum50.7256.8285.37458forward

Expression of CNT30176058

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MSLTAKRPRGGYSEKVSTTIGLVGIIFTKPASPFFKNLGLMTPVSTRPTGTVPIPPIL*

>peptide 2 (32 aa)
MTQEYKQETSIYCNHPLMNHPARFTSSFGQPW*

Sequence

>CNT30176058
GAATTAAGAGTTAATATTTAAAATGCAAACAACAATCATCGGACTAAAAATAAAATTCAAAACAGGGATATAAAACACAAATATAAAAAGTCTGATATTT
AAAATGCAAACAAACAACACAGCAAAGCGGTAAAACTTGCTGCGCTTACAAAAATGTAATCAGGGGTCCTCACAAAATCACAAAAACACATAAAAACACA
TAATAATAATGATAAAAGAGCCGCCACCGTCGATCAAGAACCCAATTTTGGGAACAAAAGTTGGGAGATGATGGTGGAAACTTCAAACTAAGTACGAAAA
ACAATCTACCTAGCGATGACACAAGAGTACAAGCAAGAAACCAGCATTTATTGTAACCATCCCCTGATGAACCACCCAGCACGATTCACTTCTTCTTTTG
GGCAGCCTTGGTGACCTTGGCTCCAGTGGGGTCCTTCTTCTCAACGCTCTTGATGACTCCCACAGCCACAGTTTGACGCATGTCCCTCACAGCAAAACGT
CCAAGAGGTGGGTACTCAGAGAAAGTCTCCACCACCATTGGTTTGGTTGGAATCATCTTCACGAAACCAGCATCACCATTCTTCAAGAACTTAGGCTTGA
TGACACCAGTTTCAACACGTCCGACAGGCACAGTTCCGATTCCTCCAATCTTGTAGACATCCTGAAGAGGAAGCCTGAGGGGCTTGTCTGATGGCCTCTT
GGGCTCAGTGATCTGGTCAAGTGCATCAAGCAAGGTAGGTCCCTTGTACCAGTCGAGGTTTGTGGACCTCTCAATCATGTTGTCTCCCTCAAAACCAGAG
ATTGGAACAAAAGGAATCTTGTCTGGATTGTATCCCACTTTCTTCAAGTAGGAGGAGACTTCCTTCACAATTTCATCATACCTAGCCTTGGAGTACTTGG
GTG