Detailed information on CNT30176025


BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 3e-33

BLAST vs NONCODE:
NONCQUT001608, E-value = 9e-18

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616510Vigna angularisSesamum indicum28.9113.4180.54185forward
CNT30525342Vigna angularisPhaseolus vulgaris29.5318.5591.53189forward
CNT30508073Vigna angularisNicotiana attenuata20.4711.7185.5131forward
CNT30710937Vigna angularisGlycine max29.5319.4689.42189forward
CNT3091744Vigna angularisSolanum tuberosum29.2218.2382.35187forward
CNT30649450Vigna angularisRosa chinensis30.7833.2881.73197forward
CNT30620550Vigna angularisCajanus cajan28.2815.1186.19181forward
CNT30705707Vigna angularisPrunus avium26.0914.8283.23167forward

Expression of CNT30176025

Peptides detected in this lncRNA

>peptide 1 (33 aa)
WVLELFKTKQQNCSNFSLILIHSFLKSEVKNIG*

Sequence

>CNT30176025
AATGGGTTCTTGAATTATTTAAGACAAAGCAACAGAACTGCAGCAACTTTTCATTAATTCTCATCCATTCATTTCTGAAATCAGAAGTCAAAAATATAGG
ATGATGAATCTCAAAAAGCAATATAACAATTGAGAATTGGTTCGATCACCAGGCTAGTTTGTATGAAGAGCATCCGTTAGGAGATGTCAATTCATTAAAT
ATATCAAATATATCTCCATACATCAAGGGATTAAGCTCTAGCTTTCCACAGAAGATACTCCGGACAACAAAAAGAGAAAAGGAAATGGGAATTTGGTTTA
AGTACAAAGCAACAAAGTGGGGTGGTTACAAATTATGGAAACTTAGTAGCCTGGTGGCTTGTAGGCAATGAAACTGATGCACTGGACTTGACGAACGTTG
TCAAAACCAATGATACGGACGAAGCCGTCGGGGTGGGCAATGAAACTGATGCACTGGACTTGACGAACGTTGTCAAAACCAATGATACGGACGAAGCCGT
CGGGGTGGGCAGTGCTGGCCTCTTGAACCTCCTTCAAAACCTGAGAAGAATCAGTGCACCCATACATAGGCAGCTTCCACATGGTCCAGTACCTTCCATC
ATAGTATCCAGGTGACCTGTTGTTCGCACGATGTGGGAAA