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Detailed information on CNT30175599


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000854, E-value = 1e-52

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690827Vigna angularisOryza sativa22.8613.3880.22369reverse complement
CNT30523685Vigna angularisSetaria italica9.6743.3383.97156reverse complement
CNT30549210Vigna angularisIpomoea triloba45.9762.7789.08742reverse complement
CNT30501657Vigna angularisCoffea canephora54.7117.9691.05883reverse complement
CNT30220178Vigna angularisHordeum vulgare22.814.8980.43368reverse complement
CNT30147536Vigna angularisMedicago truncatula21.6914.8494.29350forward
CNT30207841Vigna angularisHelianthus annuus45.5427.4488.03735reverse complement
CNT30687453Vigna angularisTriticum urartu22.86.8880.16368reverse complement
CNT30154898Vigna angularisPrunus persica39.782.6785.67642forward
CNT30574571Vigna angularisVitis vinifera73.5419.2988.461187reverse complement
CNT30495778Vigna angularisDigitaria exilis21.7583.9779.77351reverse complement
CNT30115707Vigna angularisOryza nivara22.868.4780.22369reverse complement
CNT30725731Vigna angularisLupinus angustifolius2830.1991.15452forward

Expression of CNT30175599

Peptides detected in this lncRNA

>peptide 1 (64 aa)
KSFSCLFSKVTLFILLGVRACWGRALFILHSKLMNVGSGVSALLSKRELGKANSLLGRAWGLVN*

>peptide 2 (46 aa)
MARKGNLISVRLDLNRSSDSSRFSEGDRKSHRKGQSFPSVCPIYVE*

Sequence

>CNT30175599
AAGAGCTTTTCTTGCTTGTTTAGTAAAGTCACACTTTTCATTTTGTTAGGAGTACGTGCTTGCTGGGGCAGGGCACTCTTCATTCTTCATTCGAAACTAA
TGAATGTCGGGTCGGGGGTTTCTGCCTTGTTATCAAAAAGGGAGTTGGGTAAAGCAAACTCCCTCCTTGGACGAGCATGGGGCTTAGTCAACTAGAACCG
GGTTGCGCTGCTTGATGCTCTGATCGAAAATAAATCAGTGGGGCCATGCCGGTACGACTGAATATGCGTTAAAAAGGTCAATCCCTCCCCTACGACACCA
ACAAAAAAAAACCGGGCCGAACTTATAACAGCCCGCCCGCTTCCATAGAAAAATATCGTGGCAACATAGACCTAAGTGGTCATATTAGATCTTTGGGAAC
CATCACAACTGCGACCGGCCTATATTTCAACGAGAATGTCGTGTCGTCCAGCGGAGCCTAGAAGAAGGTGACTCGCGCAGATAGCTGACTCATAGAAAGG
AGTAGCCAAACCAACCCACCCAGCTAACTGGTCAATCTCAGAGATCTTATCGACCGGCAAACCGGTGACGGACAACCATGGTCCCAACCTTATCAGCACC
GGAGGTGTACTAATCAATGAACCCCCGAAACCTACTTTCTTTTCTTACAAAATAAACCAAGCCTAACCGGTCACGACATGTTGTTGATATTGATGGAGTT
TGAGGGACTTTCGCTGACTAAATCCATCCATAAACCTAGACCCCGGCGACTCTTGTAACCAAAGCCTCAAGACAACAGCCAAAGGTGACCTTTGGATTCT
TAAGTAGGTAGGGGGCAAAGAGGAGCACGTAGGAATGCTAACCACTACATAAGCCACTGGTGGCTGAGAGAAAGCGAGTAACACCTTGTATAGGTTGGGC
GGAGCTTGAAGAAGCGAGCCCCTATCAGAGAAAACCATTGCGCGCTAGCCTAGCTAGCTAGCGTTTTTCAGCTGGCTGTTAGGTTAGTTGTAGTGTGCCT
TCCCTCCTTCTCTCACTTCGAAAAGATTTCGCAGTCTTTTCTTTGGATGACCTGGTCGAGATAGTACGATACATCGGTGTAAAAGATGGAGTGGGATCTT
TGAGGTTGGTTATAGTAAGGCCTGGCCGGAAAGTGTTATTACCTATATCATTGAAGGAAAGGTTGGTCAACAGTTTGGAGAGTTTGCTTCTACACAGAAA
CGAAGACTTTCGAAAACAAAGATTAAACCGGGAAGAAAAAAGGGCAAAAAGTAAATAAAGTGCGCATATGGCACGAAAAGGAAATCTGATTTCGGTAAGA
CTCGATCTGAATCGTAGTTCAGATTCAAGTCGGTTCAGTGAGGGCGACCGCAAAAGTCACCGAAAGGGTCAATCTTTTCCTTCAGTTTGTCCTATATATG
TTGAATAAAAAAGCTTGGGAGGACGTTGCAGATGTCCGGGACGGACACAACTTCTTCTAACGCTAGAAGACCACTGGAAGACACCCGGAACCAGAGCATG
TCGTGAAAGAAGCACACTGGGCGTGCTTCAACCGTGTCTCCGGGGCACAGTTGAATGTAGATATCATGAACGCGAGGTGCAGGATACCAGGCCAAGAAAC
CCGGGCAACCCCCC