CANTATAdb - search

Detailed information on CNT30175360

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000183, E-value = 5e-68

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30726571	Vigna angularis	Lupinus angustifolius	90.87	55.13	90.38	478	forward

Expression of CNT30175360

Peptides detected in this lncRNA

>peptide 1 (32 aa)
ISARTLSHHEVLSASRVVWECSPNRAVNSVQG*

>peptide 2 (60 aa)
YQCPDPVAPRGAVGESGCLGMQPQSGGKFRPRLNIGERPIANKYREGKMKRTLKRESKSA*

>peptide 3 (33 aa)
MCVGWMWNDPNWYADRLETLTDADCDGGPSLGC*

>peptide 4 (67 aa)
MLVETSSLRLWTAARSLGVSRHMRAPAVGLWAPHSARLETRTKESDMCASQRVSKPVRRKEADWWDPL

Sequence

>CNT30175360
TTATCAGTGCCCGGACCCTGTCGCACCACGAGGTGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTA
AATATTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAA
GGGGATGGAGGCCGACGATGTGTGTCGGTTGGATGTGGAACGATCCTAACTGGTATGCCGATCGACTCGAGACATTGACCGACGCAGATTGTGACGGTGG
CCCAAGCCTGGGCTGTTGAAATGCTCGTGGAGACGTCATCGTTGCGATTGTGGACGGCAGCACGCTCCTTAGGCGTGTCTCGACACATGCGTGCTCCGGC
CGTCGGCCTATGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCGTAAGGCGTAAG
GAAGCTGATTGGTGGGATCCCCTTGC