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Detailed information on CNT30175070


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3089447Vigna angularisVigna radiata46.9347.2894.84504forward

Expression of CNT30175070

Peptides detected in this lncRNA

>peptide 1 (42 aa)
TLLTRPQVRRGYPLSLSISISGGKETNKDSLSYGERTGNNPP*

>peptide 2 (40 aa)
MNRKLGYGAQLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 3 (40 aa)
MQPQSGGKFRPRLNTGERPIVNKYREGKMKRTLKRESKSA*

>peptide 4 (33 aa)
MRIGRPWRSNCSLEKRPQWRIGSKYPGRGRQRG*

Sequence

>CNT30175070
ACGCTCTTAACGAGACCTCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTTACG
GCGAGCGAACCGGGAACAACCCACCATGAGAATCGGTCGCCCTTGGCGTTCTAATTGTAGTCTGGAGAAGCGTCCTCAGTGGCGGATCGGGTCCAAGTAC
CCTGGAAGGGGGCGCCAAAGAGGGTGAGAGCCCCGTTGTGCCCGGACCCTGTCGCATCACGAGGCGCTATCGGCGAGTCGGGCTGTTTGGGAATGCAGCC
CCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGCGAGAGACCAATAGTGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAG
TCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGTGGATGGGGGCCAGCGATGTGTCTCGGTCGGATGTGGAACGGTCCTAACCGGTCTGCCGATCGACTCG
AGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGTTGGAGCCCACGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAG
GCATCAGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGTGCGGCTGCTTTGTTGAGCCGTGCCACGGAATCGAGAGCTCCAAG
TGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCTGGGTTACGGTGCCCAACTGCGCGCTAACCTAGACCCCACAAAGGGTGTTG
GTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGC
GCTAAAGCGCGCGACCTATACCCGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCCG
TCTGATAGTGCTTTCAACGCGTACTCCGAAAGGGAATCGGGTTAAAAATCCTGAACCGGGACGTGGCGGTTGAC