Detailed information on CNT30175012


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT002762, E-value = 6e-67

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512298Vigna angularisJuglans regia28.5717.1784.26108forward
CNT30701055Vigna angularisQuercus lobata22.2233.4790.4884forward
CNT30565889Vigna angularisActinidia chinensis20.6313.0985.978forward
CNT30146463Vigna angularisMedicago truncatula22.2226.0183.3384forward
CNT30465446Vigna angularisSaccharum spontaneum71.6912.7978.23271forward
CNT3038167Vigna angularisCucumis melo28.314.6885.05107forward
CNT30112488Vigna angularisFicus carica23.819.1784.4490forward

Expression of CNT30175012

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLDLFLTIQNQKPWPPISRPVKCLLSSHHGG*

Sequence

>CNT30175012
GTAGCAATGAGCTGCCCACTCAGCCAGACTCACTTGCTCCTTAGCAAGGGCTGGGTTCAAAGCTGGACGAGCACATAATATCTCAAAGAGAACCACCCCA
AATGAGTAAACATCAGATTTGTCAGTTAGTTGCTGCCTCCTGAAGTATTCTGGATCCAAGTACCCAAACTACCCTTTACCACAGTACTTACATGGGTATT
ATCCAATGTTGGACCTGTTTTTGACAATCCAAAATCAGAAACCTTGGCCACCCATTTCTCGTCCAGTAAAATGTTTGTTGTCTTCACATCACGGTGGATG
ATTGTGTGTTTAGCTCCAGTGTGTAGATAGTGTAAACCCCGAGCAGCTCCAATGCATATCTCAAGCCTTTGCTTCCAT