Detailed information on CNT30174901


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526253Vigna angularisPhaseolus vulgaris92.1192.1186.79280forward
CNT30629861Vigna angularisVigna unguiculata83.2253.3889.33253forward
CNT3086893Vigna angularisVigna radiata10010091.78304forward

Expression of CNT30174901

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MALRQAGFTEQRKPPSPDSGGITGCCNHGPVCPVSPVYFDHHR

>peptide 2 (68 aa)
MAKCWPARSKLRADPRDLSEGLGLLSPKVDGTASGWFHRTAKTSLSRQWRDNRLLQSRPCMPSEPSLL*

Sequence

>CNT30174901
GCCGAGTTGGGTAACGTCAGTTTGTGACTCAAGTGAGGGCATTATGGTGGTGGGATGATACTGTGGCTTTCCTGGGTTGGGCCTTGATGGCAAAATGCTG
GCCTGCCCGCTCCAAGTTGAGAGCTGACCCACGGGACCTGAGCGAAGGCTTGGGCCTCTTGAGTCCTAAAGTGGATGGCACTGCGTCAGGCTGGTTTCAC
AGAACAGCGAAAACCTCCCTCTCCAGACAGTGGAGGGATAACAGGCTGCTGCAATCACGGCCCTGTATGCCCAGTGAGCCCAGTTTACTTTGACCACCAC
CGTT