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Detailed information on CNT30174754


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 5e-155

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-113

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547448Vigna angularisIpomoea triloba59.6772.5887.67503forward
CNT30201346Vigna angularisPisum sativum78.4164.0587.14661forward
CNT3050758Vigna angularisCucumis sativus73.7874.7687.46622forward

Expression of CNT30174754

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRRTR*

>peptide 2 (36 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVR

>peptide 3 (39 aa)
MHIIYLKFHYNKGTIQSNTNQIYLRVNKDPIHSPILKMS*

>peptide 4 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

Sequence

>CNT30174754
AGGCAACATAAATTAATAACATAATGCATATTATATATCTAAAGTTTCATTATAACAAAGGGACAATACAGTCCAACACAAACCAAATTTATTTAAGGGT
CAATAAAGACCCAATCCACAGTCCGATTTTGAAGATGTCTTGAAAGCAGTAAAAAACAGAGGTCAGCACAGTCTAAAAGCCCCCACGAAGACGCAGAACA
AGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAA
TTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGAT
CTGCATGCCACCGCGGAGACGGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCGGCG
AAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGG
TCTTTCCGGTGAGGGTCTTGACAAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGT
GCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTA
TCGGAGCTCTCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGG