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Detailed information on CNT30174705


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 2e-163

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-148

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Vigna angularisNymphaea colorata57.9850.7185.4897forward
CNT3019912Vigna angularisCitrullus lanatus58.8954.5284.96911forward
CNT30727322Vigna angularisCorchorus capsularis58.8971.6883.97911forward
CNT30526024Vigna angularisPhaseolus vulgaris65.876.9589.491018forward
CNT30169882Vigna angularisPistacia vera53.3339.9986.3825forward
CNT30635990Vigna angularisCapsicum annuum59.4144.3384.77919forward
CNT3089455Vigna angularisVigna radiata72.6692.4391.731124forward
CNT3077383Vigna angularisBrassica juncea59.5371.0684.26921forward
CNT30264722Vigna angularisBrassica rapa59.5387.0583.93921forward
CNT30608839Vigna angularisGossypium raimondii58.898283.86911forward
CNT30217431Vigna angularisKalanchoe fedtschenkoi59.0267.4385.32913forward
CNT30716337Vigna angularisMalus domestica golden59.3474.0985.29918forward
CNT30326890Vigna angularisAsparagus officinalis57.9872.6983.61897forward
CNT30334104Vigna angularisCynara cardunculus57.6639.1683.74892forward
CNT30114931Vigna angularisEutrema salsugineum58.6381.7984.45907forward

Expression of CNT30174705

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRRTR*

>peptide 2 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

>peptide 3 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

>peptide 4 (56 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVRVLTKICICGVKNHKRITMM*

>peptide 5 (33 aa)
MNFMEKNKIFGQGINHTRRLLMDLKIFFEIKNC*

>peptide 6 (39 aa)
MHIIYLKFHYNKGTIQSNTNQIYLRVNKDPIHSPILKMS*

Sequence

>CNT30174705
AATTAGTTATTAATAACAAAAGTAAATCATTCCATTAGGCAACATAAATTAATAACATAATGCATATTATATATCTAAAGTTTCATTATAACAAAGGGAC
AATACAGTCCAACACAAACCAAATTTATTTAAGGGTCAATAAAGACCCAATCCACAGTCCGATTTTGAAGATGTCTTGAAAGCAGTAAAAAACAGAGGTC
AGCACAGTCTAAAAGCCCCCACGAAGACGCAGAACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCCTCCAGCTGTT
TTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCGAG
GGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATGCCACCGCGGAGACGGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCG
GCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGT
CGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGTGAAG
GGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCC
TTGTCCTGGATCTTAGCCTTTACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCATGC
CACCGCGGAGACGGAGAACTAGGTGAAGGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATGA
GACGTTGCTGGTCAGGGGGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTATCGGAGCTCTCGACCTCGAGAGTGATGGTCTTTCC
GGTAAGGGTCTTAACGAAGATCTGCATCTGCGGAGTAAAAAACCACAAACGAATCACAATGATGTAATTGAACAGCTATCCGACTGAATCAAGTAAATCT
CAAGAACAGATCTGATGAATTTCATGGAAAAAAACAAAATCTTTGGTCAGGGGATAAACCACACAAGGCGGTTGTTAATGGATCTGAAAATTTTCTTTGA
AATAAAAAACTGTTAACGGATCTGAACAATTTCTTCAAAAAAAATAATTTATAAAGGACTACAAAAAAAATTTCAAGACGCTATTGTAAAAGGGAAAGAA
AAGATGGATGAAACTGTACAAACCCTATCTTGAACACAACAAGCTAATCGAAAACACGATAGTTCACGGAACTAATGGATAACAAAAACGAACCTTGAGG
GGAGAGGTAGGGAACTGCGCAAAGAGAATGAGCTAGTTTGTTTTGAA