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Detailed information on CNT30174676


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-139

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30568725Vigna angularisActinidia chinensis80.7774.5783.7865forward
CNT30311152Vigna angularisCamelina sativa81.754.2583.89875forward
CNT30726149Vigna angularisLupinus angustifolius83.0146.6983.8889forward
CNT3066527Vigna angularisSelaginella moellendorffii72.5593.0585.07777forward
CNT3051129Vigna angularisCucumis sativus79.3796.0586.35850forward

Expression of CNT30174676

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MHIIYLKFHYNKGTIQSNTNQIYLRVNKDPIHSPILKMS*

>peptide 2 (52 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

>peptide 3 (31 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRRTR*

>peptide 4 (36 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVR

>peptide 5 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

Sequence

>CNT30174676
AGGCAACATAAATTAATAACATAATGCATATTATATATCTAAAGTTTCATTATAACAAAGGGACAATACAGTCCAACACAAACCAAATTTATTTAAGGGT
CAATAAAGACCCAATCCACAGTCCGATTTTGAAGATGTCTTGAAAGCAGTAAAAAACAGAGGTCAGCACAGTCTAAAAGCCCCCACGAAGACGCAGAACA
AGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAA
TTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGAT
CTGCATGCCACCGCGGAGACGGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCGGCG
AAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGG
TCTTTCCGGTGAGGGTCTTGACAAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGT
GCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATAGTA
TCGGAGCTCTCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAACGAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATT
CCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTATCCTG
GATCTTGGCCTTCACGTTGTCAATAGTATCGGAGCTCTCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGG