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Detailed information on CNT30174665


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30491922Vigna angularisOlea europaea10.634085.34116forward
CNT3068316Vigna angularisLeersia perrieri11.9222.4590130forward
CNT30110673Vigna angularisOryza longistaminata8.3433.5891.2191forward

Expression of CNT30174665

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MSSSAAGTLSKPRAASSQPSETSSKRKRGVFQKELQHMMYGFGDDPN

>peptide 2 (40 aa)
ITNIPCLHIGSRTGSEGSKTANSYRAIEPAQPATRAVCII*

Sequence

>CNT30174665
ATAACGAACATACCCTGTCTCCACATTGGATCAAGAACAGGGTCAGAGGGATCAAAAACTGCTAATTCATATAGAGCCATCGAACCGGCCCAACCAGCAA
CTAGAGCTGTGTGCATTATATGAACAGAAAGCAAACGGCCCGGATCATTTAAAACAACAGTATGAACACGATACCAAGAAGTATAAGATAAGGAGGCACG
GGAGTTTTAATCTGCAGGAATTAGAGTGCCTAGAACCACTTGGTCGAGAGAGTGTTTTTGAGAACAGGTGAACAAGTTGCTGGAAATTTTCAAGGTTATA
GGAGAATTCTGGTGGTGCAAAGAAAAGAAATTGAGAGGAACCCAAGATATGAAATAAATTGGGCTTCTATGCTGACTGAACTGGCACTGGGTTGCTGAAA
TTGGGTGCTACAAGTGGAAATTTGAACGTTGCTGCTGCATTGGAGAATTGGGCCACTTGAGCTGCCACTGCATTAGGCTGAAAGTGAATTGGGCTGCATG
GGCTGATTTCAATTAATTGGAACGGCGCCGTTTTGGAGGCTGGCAGCTGCAGTTCCCTTGGGGGTCTTCGCGTGCGTAATTCATTTGGGGAAAGAATTCA
ATGTGCTTGCATTTGGAGAGAAGAAACACTTAAGCTAGGGCTTGTGCGAGAGAAGCAAGGGAGAAGAAAAGCTCTCGCCACTTACCCAAAGAAGAACCTG
ACCGGTGGAGCTGAAGACATGACCGGAGCGCGATCCTCGCCAGAGAAGAAGCTGACCGAAGCTTAAGTGGATCGGAGGGTTTAGAGCGCACAGCTTTTGG
AGACCGTTGGATCAAGGTGAAGCTCGAAGCGTCACAGCAAGGATAGAACCTACAAACTGCATTGAAAGATCCAAAAGTATCTTCAATCTCTCCTATTCAT
TAACTCCAGATACCCTGAAGATAACAGTATAAGCATTGACCTATAGCAATGAGCAGCTCTGCTGCTGGAACCTTATCAAAACCAAGAGCAGCTTCCTCAC
AACCATCAGAAACATCATCCAAGCGCAAAAGAGGAGTTTTCCAAAAAGAATTGCAGCACATGATGTATGGCTTTGGAGATGATCCTAATTA