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Detailed information on CNT30174651


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-157

BLAST vs NONCODE:
NONTPRT002153, E-value = 1e-117

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315749Vigna angularisCorylus avellana49.6742.0686.53683forward
CNT30630785Vigna angularisVigna unguiculata60.8798.1292.11837forward
CNT3089456Vigna angularisVigna radiata100.8793.2189.41387forward
CNT30726539Vigna angularisLupinus angustifolius49.671.7186.07682forward

Expression of CNT30174651

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

>peptide 2 (31 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRRTR*

>peptide 3 (56 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVRVLTKICICGVKNHKRITMM*

>peptide 4 (33 aa)
MNFMEKNKIFGQGINHTRRLLMDLKIFFEIKNC*

>peptide 5 (39 aa)
MHIIYLKFHYNKGTIQSNTNQIYLRVNKDPIHSPILKMS*

Sequence

>CNT30174651
TTAGTTATTAATAACAAAAGTAAATCATTCCATTAGGCAACATAAATTAATAACATAATGCATATTATATATCTAAAGTTTCATTATAACAAAGGGACAA
TACAGTCCAACACAAACCAAATTTATTTAAGGGTCAATAAAGACCCAATCCACAGTCCGATTTTGAAGATGTCTTGAAAGCAGTAAAAAACAGAGGTCAG
CACAGTCTAAAAGCCCCCACGAAGACGCAGAACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCCTCCAGCTGTTTT
CCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGG
TGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATGCCACCGCGGAGACGGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC
GAGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTTACGTTGTCG
ATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGTGAAGGG
TTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTT
ATCCTGGATCTTGGCCTTCACGTTGTCAATAGTATCGGAGCTCTCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAACGAAGATCTGCATCTGC
GGAGTAAAAAACCACAAACGAATCACAATGATGTAATTGAACAGCTATCCGACTGAATCAAGTAAATCTCAAGAACAGATCTGATGAATTTCATGGAAAA
AAACAAAATCTTTGGTCAGGGGATAAACCACACAAGGCGGTTGTTAATGGATCTGAAAATTTTCTTTGAAATAAAAAACTGTTAACGGATCTGAACAATT
TCTTCAAAAAAAATAATTTATAAAGGACTACAAAAAAAATTTCAAGACGCTATTGTAAAAGGGAAAGAAAAGATGGATGAAACTGTACAAACCCTATCTT
GAACACAACAAGCTAATCGAAAACACGATAGTTCACGGAACTAATGGATAACAAAAACGAACCTTGAGGGGAGAGGTAGGGAACTGCGCAAAGAGAATGA
GCTAGTTTGTTTTGAAATGCACTGTGAAGAGAAACGGGGGGTGTGGGCCTTTTTATAGCTAAAGGGGTGGAATCC