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Detailed information on CNT30174646


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-138

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693865Vigna angularisOryza sativa82.5367.9885.23860forward
CNT30528288Vigna angularisEucalyptus grandis85.666.5787.78892forward
CNT30513419Vigna angularisJuglans regia63.3477.187.88660forward
CNT30279009Vigna angularisChenopodium quinoa85.1258.0585.01887forward
CNT30710308Vigna angularisGlycine max66.1274.5787.66689forward
CNT3044330Vigna angularisPrunus dulcis85.2272.6184.91888forward
CNT3094992Vigna angularisSolanum tuberosum86.4777.4185.57901forward
CNT30191758Vigna angularisSecale cereale83.6957.2686.47872forward
CNT30305252Vigna angularisTriticum aestivum69.6785.0186.36726forward
CNT30226205Vigna angularisHordeum vulgare82.4483.2486.5859forward
CNT30562217Vigna angularisActinidia chinensis65.2667.5386.91680forward
CNT30553671Vigna angularisOryza glaberrima82.5373.9585.47860forward
CNT30312659Vigna angularisCamelina sativa82.9243.8884.26864forward
CNT30142111Vigna angularisLolium perenne83.8870.7186.96874forward
CNT307928Vigna angularisZea mays81.3871.1485.26848forward
CNT30228911Vigna angularisAnanas comosus83.7856.0787.97873forward
CNT30652285Vigna angularisRosa chinensis85.673.2986.1892forward
CNT30623044Vigna angularisDaucus carota85.4145.1385.06890forward
CNT30595768Vigna angularisOryza meridionalis81.6761.8986.72851forward
CNT30359535Vigna angularisLactuca sativa85.652.8184.19892forward
CNT30704854Vigna angularisPrunus avium85.0349.6985.78886forward
CNT30110940Vigna angularisOryza longistaminata79.6530.685.06830forward
CNT30116852Vigna angularisOryza nivara83.8873.5785.7874forward
CNT30593897Vigna angularisEragrostis curvula82.7376.7685.73862forward
CNT30603673Vigna angularisOryza punctata63.6367.0487.18663forward
CNT30334108Vigna angularisCynara cardunculus82.8237.0583.66863forward
CNT30114615Vigna angularisEutrema salsugineum84.8490.1184.73884forward

Expression of CNT30174646

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

>peptide 2 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

>peptide 3 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

>peptide 4 (36 aa)
IYLKFHYNKGTIQSNTNQIYLRVNKDPIHSPILKMS*

>peptide 5 (37 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVRV

Sequence

>CNT30174646
ATATATCTAAAGTTTCATTATAACAAAGGGACAATACAGTCCAACACAAACCAAATTTATTTAAGGGTCAATAAAGACCCAATCCACAGTCCGATTTTGA
AGATGTCTTGAAAGCAGTAAAAAACAGAGGTCAGCACAGTCTAAAAGCCCCCACGAAGACGCAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTGTA
GTCGGCGAGGGTGCGGCCATCCTCCAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTCACA
TTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGT
GAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCC
CTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGC
ATGCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTTCCAGCGAAGA
TCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTTACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTT
TCCGGTGAGAGTCTTGACAAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGG
CCATCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTATCGG
AGCTCTCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGGTCT