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Detailed information on CNT30174644


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 2e-56

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3087029Vigna angularisVigna radiata77.5258.1493.67600forward
CNT3051304Vigna angularisCucumis sativus9.5621.1486.4974forward

Expression of CNT30174644

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRIFLLYKNATTNLCQPQKLRFIVHSNKK*

>peptide 2 (33 aa)
MSASKIEIYCPFKQEVICWKTCSLQGIVRPPMG*

>peptide 3 (32 aa)
MLEDMFAARNCEATHGMIISKLFLSLTQQVLE*

Sequence

>CNT30174644
AGAACATAAATTTTGGGTCTCGAGGAGTTTGATTTGGCGTATGTGATCGCATTTGATCTCTTGGTCAGGCTTTGCCCGACTTATATAGTTTGTAGGAAAG
GAATCCAAGAGATATTTTGCACAATTGGGTAGCAGAGAAAGTGCTTCAATTCTGATTTCGGAAAAAGAAAATTGTCAACTGGATGGTCTTTCATTTCCCA
AATTCTCAGGAAAGAGACAACTTTACAAGATGAGAATATTCCTATTGTACAAAAATGCTACTACTAATCTATGTCAGCCTCAAAAATTGAGATTTATTGT
CCATTCAAACAAGAAGTAATATGTTGGAAGACATGTTCGCTGCAAGGAATTGTGAGGCCACCCATGGGATGATCATATCCAAACTCTTCCTCAGCTTGAC
TCAACAAGTCTTGGAATAGCGGTTGGTTCAGGTGTGATACAGGAATCACAAACCGTTTCATATTCTCTCCGACATAGACTGCAAGGTATCCCTTTGGCGC
ATCCAACACTTTTGAAGATGATTGATTTCTCCCAGATGAAGTCCTTCTGATACCGGGTAAACGAAAGCCCATTGTTGTATTAACCGTGTGAGAAATTCGA
GAACAAAAGGGTTTTGAGAAATTCTTGAAACTAAGTTTTTGAATTTTGAATGCTTTAGGATGTGAATGATCTGTGTTGGTTCTAAACGTGTGCAGCCATG
AATTATATATAGAGATAAAAGGCTATCGGAGAAACCACTTGATAGATGAATTATTGATTCAGGAGAGATATGAG