« Back to Vigna angularis search


Detailed information on CNT30174546


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W3Y4|METK_PHALU, E-value = 2e-153

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641080Vigna angularisNymphaea colorata21.4418.3283.54164forward
CNT30549537Vigna angularisIpomoea triloba25.3629.1385.57194forward
CNT30698521Vigna angularisQuercus lobata37.7851.5280.28289forward
CNT30373104Vigna angularisArabidopsis thaliana27.1924.7983.65208forward
CNT30618114Vigna angularisSesamum indicum26.5444.9181.77203forward
CNT3021108Vigna angularisCitrullus lanatus30.3314.0984.48232forward
CNT30524850Vigna angularisPhaseolus vulgaris23.9225.3586.34183forward
CNT3047443Vigna angularisPrunus dulcis48.130.8584.78368forward
CNT30638840Vigna angularisCapsicum annuum22.2219.9182.35170forward
CNT3090332Vigna angularisSolanum tuberosum43.1450.7783.94330forward
CNT30188757Vigna angularisSecale cereale43.9275.8582.44336forward
CNT30225130Vigna angularisHordeum vulgare35.4264.2281.92271forward
CNT30389985Vigna angularisTriticum turgidum20.6515.5485.44158forward
CNT30508429Vigna angularisSolanum lycopersicum8.125.187.162forward
CNT30441436Vigna angularisAegilops tauschii20.2630.5783.87155forward
CNT3082721Vigna angularisBrassica juncea21.0555.7179.5161forward
CNT3013982Vigna angularisZea mays32.8186.5582.87251forward
CNT30606743Vigna angularisGossypium raimondii22.8816.3982.29175forward
CNT3066706Vigna angularisLeersia perrieri16.8637.9486.05129forward
CNT30212612Vigna angularisHelianthus annuus19.0860.5884.25146forward
CNT30349162Vigna angularisEragrostis tef28.8924.2685.07221forward
CNT3055164Vigna angularisAmborella trichopoda44.1829.3981.95338forward
CNT30113329Vigna angularisFicus carica27.9719.8782.24214forward

Expression of CNT30174546

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFTRTLQLSASSPTSSEMKPMFLQVSRTIFS*

>peptide 2 (89 aa)
TARGVQVENGLLIKVLLGNHGLDHVLFQISSNFIIRDSLVMLCGDEHGVDTNWNHGTLVIVILNSHLGLAIRSEPRAGTVLPNLSETSP*

>peptide 3 (45 aa)
MLALVVISPKTMTKLVLVHVSQATLLSGSCSRQASRTASEIWSQSL

>peptide 4 (60 aa)
RPEGFKWKMVFSSRYFSGITGLITCSFRSAAISSFVTVSSCCVEMSTVWTRTGTMAPLSL*

Sequence

>CNT30174546
ACGGCCAGAGGGGTTCAAGTGGAAAATGGTCTTCTCATCAAGGTACTTCTCGGGAATCACGGGCTTGATCACGTGCTCTTTCAGATCAGCAGCAATTTCA
TCATTCGTGACAGTCTCGTCATGTTGTGTGGAGATGAGCACGGTGTGGACACGAACTGGAACCATGGCACCCTTGTCATTGTAATACTCAACAGTCACTT
GGGTCTTGCCATCAGGTCTGAGCCAAGGGCAGGTACCGTTCTTCCGAACCTCAGTGAGACGAGCCCCTAGTTTGGTTGCGAGGACGTGGCTCAAGGGCAT
CAATTCAGGGGTCTCGTCGGTGGCATAGCCGAACATGTGACCCTGGTCGCCGGCACCGATTTCTTCAGGTCTTTTGGTGAGGTGGACGTGGCTCAAGGGC
ATCAATTCAGGGGTCTCGTCGGTGGCATAGCCGAACATGTGACCCTGGTCGCCGGCACCGATTTCTTCAGGTCTTTTGGTGAGGTGGCCATGCACGCCCT
GGGCAATATCAGGACTCTGCTGCTCAATGTTCACAAGGACCTTGCAGTTGTCGGCATCAAGTCCCACATCGTCTGAGATGAAGCCGATGTTCCTGCAGGT
GTCACGCACGATCTTCTCGTAGTCAATGTTGGCCTTGGTGGTGATTTCTCCGAAGACCATGACCAAGTTGGTTTTGGTGCATGTCTCACAAGCAACCTTG
CTCTCTGGATCTTGCTCAAGGCAGGCGTCAAGAACAGCATCGGAGATTTGGTCGCAGAGCTTGTC