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Detailed information on CNT30174498

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30678225	Vigna angularis	Setaria viridis	42.77	66.46	92.59	216	forward
CNT30524663	Vigna angularis	Setaria italica	78.61	68.21	88.66	397	forward
CNT30641718	Vigna angularis	Nymphaea colorata	78.61	73.38	93.95	397	forward
CNT30549212	Vigna angularis	Ipomoea triloba	79.41	13.29	95.01	401	forward
CNT30513456	Vigna angularis	Juglans regia	78.61	12.51	96.73	397	forward
CNT30272552	Vigna angularis	Chenopodium quinoa	78.61	31.56	89.92	397	forward
CNT30730494	Vigna angularis	Corchorus capsularis	78.61	45.11	95.72	397	forward
CNT30630109	Vigna angularis	Vigna unguiculata	78.61	12.6	100	397	forward
CNT30195089	Vigna angularis	Pisum sativum	70.89	20.6	88.83	358	reverse complement
CNT30294119	Vigna angularis	Triticum aestivum	40.99	75.82	93.24	207	reverse complement
CNT30396824	Vigna angularis	Triticum turgidum	78.61	39.42	87.91	397	reverse complement
CNT30569398	Vigna angularis	Actinidia chinensis	78.61	20.32	96.47	397	forward
CNT30552690	Vigna angularis	Oryza glaberrima	78.61	25.93	87.66	397	forward
CNT30442196	Vigna angularis	Aegilops tauschii	74.46	44.34	89.1	376	reverse complement
CNT30660220	Vigna angularis	Triticum dicoccoides	48.51	72.27	92.24	245	reverse complement
CNT303548	Vigna angularis	Zea mays	78.61	27.88	88.66	397	reverse complement
CNT30215429	Vigna angularis	Helianthus annuus	71.29	51.14	96.67	360	forward
CNT30688674	Vigna angularis	Triticum urartu	78.61	30.14	88.41	397	forward
CNT30347837	Vigna angularis	Eragrostis tef	68.51	44.88	89.31	346	reverse complement
CNT30363261	Vigna angularis	Sorghum bicolor	78.61	31.19	88.41	397	forward
CNT30620564	Vigna angularis	Cajanus cajan	78.61	7.67	98.74	397	reverse complement
CNT30596724	Vigna angularis	Oryza meridionalis	75.84	15.83	88.25	383	reverse complement
CNT30410880	Vigna angularis	Papaver somniferum	78.61	43.82	96.22	397	forward
CNT30642274	Vigna angularis	Cannabis sativa	79.01	48.84	90.73	399	reverse complement
CNT3036965	Vigna angularis	Cucumis melo	78.02	54.12	96.7	394	forward
CNT30331560	Vigna angularis	Dioscorea rotundata	63.96	63.96	90.4	323	reverse complement
CNT30104374	Vigna angularis	Oryza rufipogon	78.61	29.89	87.15	397	reverse complement
CNT30497700	Vigna angularis	Digitaria exilis	20	18.46	89.11	101	reverse complement
CNT30604015	Vigna angularis	Oryza punctata	37.23	38.92	94.15	188	reverse complement
CNT30551087	Vigna angularis	Oryza brachyantha	42.77	72.48	92.13	216	reverse complement

Expression of CNT30174498

Peptides detected in this lncRNA

>peptide 1 (43 aa)
FTGVGVRALRGPFPSTRGPGRTHLWCASYRAHGKRWSIERTFP*

Sequence

>CNT30174498
ATTTACCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTGCCAGTTATCGTGCCCACGGT
AAACGCTGGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTGCCAGTTATCGTGCCCACGGTAAACGCTGGGTA
GCCAAGTGCGGAGCGGATAACTGCTGAAAGCATCTAAGTAGGAAACCCACCCCAAGATGAGTGCTCTCCTATTCCGACTTCCCCAGAGCCTCCGGTAGCA
CAGCCGAGACAGCGATGGGTTCTCTGCCCCAGCGGGGATGGAGCGAAAGAAGTTTTGAGAATTCAAGAGAAGGTCACGGCGAGACGAGCCGTTTCTAATT
AATGATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCTAACAGACCGTTAGACTTGAACCTTGTTCCTACATGATCCGATCAATTCG
ATCAG