Detailed information on CNT30174484


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 1e-109

BLAST vs NONCODE:
NONMTRT001024, E-value = 2e-85

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701458Vigna angularisQuercus lobata99.5949.7484.8487forward
CNT30525213Vigna angularisPhaseolus vulgaris96.7356.7191.54473forward
CNT30629221Vigna angularisVigna unguiculata93.2535.5788.82456forward
CNT30712003Vigna angularisGlycine max96.5257.9989.41472forward
CNT3085936Vigna angularisVigna radiata80.9818.3194.7396forward
CNT30609009Vigna angularisGossypium raimondii95.7149.0685.47468forward

Expression of CNT30174484

Peptides detected in this lncRNA

>peptide 1 (89 aa)
LETTAKAKDKMQGRFLLNIVVCQGTTIFQLLPSKNKPLLIWWDALLVLNLCLHIINCIRAFHLQGYGLSCQSLDKNLHTTSQTKHQVQG*

>peptide 2 (30 aa)
MVSELSTSKVMVFPVKVFTKICIPPLNRSTK

Sequence

>CNT30174484
GCTTAGAAACCACCGCGAAGGCGAAGGACAAGATGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTACGACCATCTTCCAATTGCTTCCCAG
CAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTTGTCTTCACATTATCAATTGTATCAGAGCTTTCCACCTCCAAGGTTAT
GGTCTTTCCTGTCAAAGTCTTGACAAAAATTTGCATACCACCTCTCAAACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGAATATTGTAATCAGCAAGG
GTCCTTCCATCCTCAAGTTGTTTACCAGCGAAAATAAGCCTCTGCTGATCAGGAGGGATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGG
TATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCATACCACCCCTTAACCGGAGCACCAAG