Detailed information on CNT30174473


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SU33|ERLL3_ARATH, E-value = 4e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376702Vigna angularisArabidopsis thaliana20.788.2488.6853forward
CNT30709039Vigna angularisGlycine max89.4136.4291.67228forward
CNT3085988Vigna angularisVigna radiata99.2243.3297.63253forward
CNT30145276Vigna angularisMedicago truncatula38.4313.2384.6998forward
CNT30480470Vigna angularisArabidopsis halleri21.1811.8288.8954forward
CNT30334721Vigna angularisCynara cardunculus37.2513.5383.1695forward

Expression of CNT30174473

Peptides detected in this lncRNA

>peptide 1 (52 aa)
ESEMGRLRSKVSEMGRLRLIPKIFALRAVQRHTAASRSTRPLRRLQQGVTGG*

Sequence

>CNT30174473
GGGAGAGTGAGATGGGAAGGTTGAGAAGCAAGGTGAGTGAGATGGGAAGGTTGAGGTTGATACCCAAAATATTTGCTCTAAGGGCAGTGCAGAGACACAC
TGCAGCCTCAAGATCAACCAGACCATTGAGGAGGCTACAGCAAGGGGTAACTGGTGGTTGACCCAAGGTGACGTTCACCAACCCGTTTAGCACATTGGCA
CACACTCCTAGTTTAAGTGCATCACGGGGGCATGTGGTCCCAGAACCACCAGAGC