Detailed information on CNT30174426


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378220Vigna angularisArabidopsis thaliana6.8528.2184.4490forward
CNT30526500Vigna angularisPhaseolus vulgaris15.8489.6693.27208reverse complement
CNT30146786Vigna angularisMedicago truncatula11.267.7480.27147reverse complement
CNT30622048Vigna angularisCajanus cajan11.5822.6287.5152forward
CNT30725287Vigna angularisLupinus angustifolius18.3527.5483.82241forward

Expression of CNT30174426

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLSITFSDFEGRNKCMLLEQQSPISIAALLDSLDLHSSHHLKRA*

>peptide 2 (83 aa)
MRCLASFDERKLWGCLFLSIGSVFFVGFFFVAVISKLLPPSHFPLISALQNDWYYCFLVPLTLPIIVVAVYFHWLSMKLFKHA*

>peptide 3 (34 aa)
MQCVVWLHLMRENCGDACFCQLVLFSLLGFSLLL*

>peptide 4 (32 aa)
TVVKKTINKPTAEPARTAEHKLPKGRREPRCR*

>peptide 5 (29 aa)
MHLNIEYVNVYIKGAYVLSTTKQVYVRVN*

>peptide 6 (43 aa)
MYAVGATITYINCCLVRFSGLALLSSPKKSIMIKMLNVIICVN*

>peptide 7 (39 aa)
NGSEENNKQTYGRASTNSRAQTSERKKRTTVPVGTAAIW*

>peptide 8 (37 aa)
MLVSVNWFCFLCWVFLCCCDFQAFATFSFSPHFCITK*

>peptide 9 (34 aa)
MTGRQRRHKLRQQRRRGEQRESQRLANKGCLPSG*

Sequence

>CNT30174426
AAACGGTAGTGAAGAAAACAATAAACAAACCTACGGCAGAGCCAGCACGAACAGCAGAGCACAAACTTCCGAAAGGAAGAAGAGAACCACGGTGCCGGTA
GGAACGGCAGCGATTTGGTGACCTGAGAAGAGAACCACCGCACGCTACCACGCCGATGACCGGACGACAACGACGTCACAAACTGCGGCAACAACGACGG
CGTGGAGAACAAAGAGAATCACAGCGCCTCGCGAACAAAGGGTGCCTTCCGTCGGGATAGGGATAGAGAGCCCTGAAAGCGTCCTCGAGTAGAGGCGGAT
GCGTCGGTCTTCCGCAAGCAGTAGACGACAAGAAGAACGAACCCTACCCCGCGAGCAGTAGAGGACATGAACGAACCCTAATCGCGAAATCTCTTCAGAG
GTGTTTGATTGTGGTGAAGGTTGAGTGATGCAATGCGTTGTTTGGCTTCATTTGATGAGAGAAAATTGTGGGGATGCTTGTTTCTGTCAATTGGTTCTGT
TTTCTTTGTTGGGTTTTTCTTTGTTGCTGTGATTTCCAAGCTTTTGCCACCTTCTCATTTTCCCCTCATTTCTGCATTACAAAATGACTGGTACTACTGC
TTCTTGGTGCCATTGACTCTCCCTATAATTGTTGTTGCTGTGTACTTTCATTGGCTCAGCATGAAGTTGTTCAAGCATGCTTAGCATAACCTTCTCAGAT
TTTGAAGGCAGAAATAAATGTATGCTGTTGGAGCAACAATCACCTATATCAATTGCTGCCTTGTTAGATTCTCTGGACTTGCACTCCTCTCATCACCTAA
AAAGAGCATAATGATTAAGATGTTAAATGTGATTATATGTGTGAATTAACATGCAGAATCGTTCCTATTTAATCAAAGGCCTCGGTTTTAAATCCTGAAT
ATTGTGCTAAATATTTGCCCAAGTTCTATTTTCCAGAGCGATCTTAAAAGTTGAATGCACAGTACAAATGCATTTAAACATTGAATATGTAAACGTATAT
ATAAAGGGTGCTTATGTATTGTCTACTACAAAACAAGTTTACGTGCGAGTTAACTAGGTTCATGGGTGTGGGAACATAAACTTATTTACGCGTTGACTTG
TGATTATTGATTATTTCCACGTATATTCTTTTTAAATTATATTTTCGTTTTTGATATTATTGATAGGAAAATTTGATCATTGTAAAGAATATTTTAAATC
CTAGATTTTTCTCTTTCTTCATTGCTGCAACCAACTTATAGGAATCCCAACTCATAGTTCCATTCGCTTTTAGAGTAGTGATACTTAAATCATCAATGAA
ATATGATGTCATT