Detailed information on CNT30174415


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST004927, E-value = 1e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383810Vigna angularisTriticum turgidum33.4632.6595.98174forward
CNT30511593Vigna angularisSolanum lycopersicum33.2726.5788.44173reverse complement
CNT30720843Vigna angularisTriticum spelta38.6593.4985.07201reverse complement
CNT30602362Vigna angularisGaldieria sulphuraria15.5829.7883.9581forward
CNT30115272Vigna angularisEutrema salsugineum41.7344.6589.4217reverse complement

Expression of CNT30174415

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLSAVIRSALGYPAFTVGTITGTPEHSSWGGFPT*

>peptide 2 (46 aa)
MLSAVIRSALGYPAFTVGTITGTPEVRPSRSSRTRERSSQCSNAHTG

Sequence

>CNT30174415
CTGATCGAATTGATCGGATCATGTAGGAACAAGGTTCAAGTCTAACGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTA
TCATTAATTAGAAACGGCTCGTCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTTTCGCTCCATCCCCGCTGGGGCAGAGAACCCATCGCTGTCTC
GGCTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGTTTCCTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCAC
TTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGCACACCAGAGCACTCATCTTGGGGTGGGTTTCCTACTTAGATGCTTTCAGCAGTTATCCGCTC
CGCACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGC
TCTAACGCCCACACCGGTAA