CANTATAdb - search

Detailed information on CNT30174385

BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 2e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30629094	Vigna angularis	Vigna unguiculata	64.45	60.36	86.53	542	forward
CNT30709079	Vigna angularis	Glycine max	29.85	40.48	89.24	251	forward
CNT3086073	Vigna angularis	Vigna radiata	44.47	28.14	89.04	374	forward

Expression of CNT30174385

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MWSQNHQSLLNHQIHRSHLNHPNHLSHRNLPSHLNHPNHLKDLV*

>peptide 2 (41 aa)
MLWPRVWPRASPTSRDKGKEEDVECEEKSKGRASFGTHLKP*

>peptide 3 (39 aa)
MGRLRLIPKIFALRAVQRHTAASRSTRPLRRLQQGVTGG*

>peptide 4 (33 aa)
MKYDRRKRKSRRRKVDEDDMIYVVIKHTGNHVG*

Sequence

>CNT30174385
AACAAATTAAGAAGAATTATTGTAATATAATCATGTCTCAAAGAAATAAGTAACAGCATATTGTTCATGTTTGGTTCCCAGGCTACGATTTACAGAAATA
ATAGCATCAGGAACTTTATACTTATTGCAACAACACTCTAACCATGGAACTAAAAGAAATAAGGAGGAGGGAGAAGCTAACCCTCATGCACGTACAATCA
ATTAGAAAACACACAGGTTGATGAAATATGACAGAAGAAAAAGGAAATCCAGACGTAGAAAAGTAGATGAAGATGATATGATATATGTTGTGATTAAGCA
CACTGGAAATCACGTGGGGTAGTTCTGGAGCAAACATTGAGAAGCAAGGAGAGTGAGATGGGAAGGTTGAGGTTGATACCCAAAATATTTGCTCTAAGGG
CAGTGCAGAGACACACTGCAGCCTCAAGATCAACCAGACCATTGAGGAGGCTACAGCAAGGGGTAACTGGTGGTTGACCCAAGGTGACGTTCACCAACCC
GTTTAGCACATTGGCACACACTCCTAGTTTAAGTGCATCACGGGGGCATGTGGTCCCAGAACCACCAGAGCCTCCTGAACCACCAGATCCACCGGAGCCA
CCTGAACCACCCGAACCACCTGAGCCACCGGAACCTCCCGAGCCACCTGAACCACCCGAACCACCTGAAGGACTTGGTTTGACAGGCTTATGCTTTGGCC
TAGGGTGTGGCCCAGGGCAAGTCCCACAAGCAGAGACAAGGGCAAAGAAGAGGATGTTGAATGTGAAGAAAAGAGCAAGGGAAGAGCTAGTTTTGGAACC
CATCTTAAACCGTAGCAGTTCCTGATATTGATGAATCGCAA