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Detailed information on CNT3017415


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30467793Zea maysSaccharum spontaneum24.5345.0286.26131forward

Expression of CNT3017415

Peptides detected in this lncRNA

>peptide 1 (51 aa)
HIVQTNTPFVLLLALIHHNGEDPRSHKHPRVLSTFHGSCGILCWSCTDNKR*

>peptide 2 (96 aa)
MVKILDHISIRGFFLLFMVLVASFVGHAQIIRGETKEDNDTKSMTMTTMRPGSYVTSMDEKSSLCFEDIKTLWYICRTTYHLYRTLKDCLSHCNSM*

Sequence

>CNT3017415
CACATTGTTCAGACAAACACGCCATTTGTATTATTATTAGCTCTTATCCATCACAATGGTGAAGATCCTAGATCACATAAGCATCCGAGGGTTCTTTCTA
CTTTTCATGGTTCTTGTGGCATCCTTTGTTGGTCATGCACAGATAATAAGAGGTGAAACCAAAGAGGACAACGACACCAAGAGCATGACGATGACAACAA
TGAGACCAGGAAGCTATGTAACTAGCATGGATGAAAAATCTAGCTTGTGCTTTGAGGATATAAAAACTTTATGGTACATCTGCAGAACAACTTATCACCT
TTATAGGACATTGAAGGATTGCCTGTCGCATTGCAACAGTATGTGATGCACCATGTTGGAAAAAAAGAACTAATAAGAGGCCATGCTTTCTCAAGATTGT
AGATTGAGATGGTGAAGATGTTCTACCCAATCATCCATGCATGTACCAAGGGATAAAAAACTATAAGATTAATTATTAGTTATCATTAAGTGTTCCCAGC
TTTAGGAAATGTCATTTTCTCAAGAGTATTTTCG